RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 TIMP1P01033 207 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 CTSAP10619 480 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 PXNP49023 591 aaPredicted RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 RAPSNQ13702 412 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 PTGR1Q14914 329 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 TAF13Q15543 124 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 TMIGD1Q6UXZ0 262 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 ZDHHC21Q8IVQ6 265 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 OR4K1Q8NGD4 311 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 METTL21AQ8WXB1 218 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 KCNJ9Q92806 393 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 C5orf34Q96MH7 638 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 P2RY13Q9BPV8 354 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 EFCAB11Q9BUY7 163 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 BOCQ9BWV1 1114 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 MOCS1Q9NZB8 636 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 CD36P16671 472 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 CD72P21854 359 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 ACADVLP49748 655 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 STXBP1P61764 594 aaKnown RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 WDR5P61964 334 aaKnown RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 GANABQ14697 944 aaKnown RBP13.19□□□□□ -0.3
C15orf39-202ENST00000394987 TIMM50Q3ZCQ8 353 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 ALKAL1Q6UXT8 129 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 TMEM135Q86UB9 458 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 FNDC8Q8TC99 324 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 DOK4Q8TEW6 326 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 PIH1D2Q8WWB5 315 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 SMARCD2Q92925 531 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 SNTG1Q9NSN8 517 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 MKS1Q9NXB0 559 aa13.19□□□□□ -0.3
C15orf39-202ENST00000394987 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ZNF30P17039 623 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 TOP3AQ13472 1001 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 NDUFA9Q16795 377 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 FAM171BQ6P995 826 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 PPP1R14AQ96A00 147 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 COL21A1Q96P44 957 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 C20orf27Q9GZN8 174 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ALKBH4Q9NXW9 302 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CLIC1O00299 241 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CD68P34810 354 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CCR8P51685 355 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 OR2B6P58173 313 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SCAPQ12770 1279 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ZNF829Q3KNS6 432 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 ZNF544Q6NX49 715 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 TMEM173Q86WV6 379 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 LRRC17Q8N6Y2 441 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 TMEM203Q969S6 136 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 MRPL48Q96GC5 212 aaKnown RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CLSTN3Q9BQT9 956 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 NLE1Q9NVX2 485 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 EP400Q96L91 3159 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 IGLON5A6NGN9 336 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 HCN1O60741 890 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 S1PR4O95977 384 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SLC35E2BP0CK96 405 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 PTNP21246 168 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 MASP1P48740 699 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 NCBP2P52298 156 aaKnown RBP eCLIP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 RPS3AP61247 264 aaKnown RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 RPS13P62277 151 aaKnown RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 RFTN2Q52LD8 501 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SMPDL3AQ92484 453 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 NCSTNQ92542 709 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 RC3H2Q9HBD1 1191 aaKnown RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 MCUBQ9NWR8 336 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
C15orf39-202ENST00000394987 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
C15orf39-202ENST00000394987 A0A1W2PQU0 124 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 EFCAB9A8MZ26 197 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 HTRA2O43464 458 aaPredicted RBP13.17□□□□□ -0.3
C15orf39-202ENST00000394987 B4GALT2O60909 372 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 SNAP29O95721 258 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 POLR2CP19387 275 aaPredicted RBP13.17□□□□□ -0.3
C15orf39-202ENST00000394987 SLC7A1P30825 629 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 PRR5P85299 388 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 CEACAM7Q14002 265 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 SEMA3AQ14563 771 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 UAP1L1Q3KQV9 507 aa13.17□□□□□ -0.3
C15orf39-202ENST00000394987 MLIPQ5VWP3 458 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms