RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 STAMBPO95630 424 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 SEMA4FO95754 770 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 CHRNB1P11230 501 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 TIA1P31483 386 aaKnown RBP eCLIP17.22■□□□□ 0.356e-6■□□□□ 11.3
CLDND1-204ENST00000394185 KIAA1024LP59773 190 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 CTBSQ01459 385 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 TDGQ13569 410 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 GAS6Q14393 721 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 SMAD2Q15796 467 aaKnown RBP17.22■□□□□ 0.35
CLDND1-204ENST00000394185 RPE65Q16518 533 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 FXNQ16595 210 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 SPIN4Q56A73 249 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 RUNDC3AQ59EK9 446 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 AMIGO2Q86SJ2 522 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 CLECL1Q8IZS7 167 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 DUS3LQ96G46 650 aaKnown RBP17.22■□□□□ 0.35
CLDND1-204ENST00000394185 KCNH6Q9H252 994 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 USP36Q9P275 1121 aaKnown RBP17.22■□□□□ 0.35
CLDND1-204ENST00000394185 ICKQ9UPZ9 632 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 MAN2B2Q9Y2E5 1009 aa17.22■□□□□ 0.35
CLDND1-204ENST00000394185 DHRS12A0PJE2 317 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 GABRR3A8MPY1 467 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 TPST1O60507 370 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 IGHV4-34P06331 123 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 HTR1EP28566 365 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 RAB28P51157 221 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 KRT33BQ14525 404 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 SPATS1Q496A3 300 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 LRIF1Q5T3J3 769 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 SLC30A9Q6PML9 568 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 PRR23BQ6ZRT6 265 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 Q7L0L9 218 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 ADGRG5Q8IZF4 528 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 DENND6BQ8NEG7 585 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 SLC2A4RGQ9NR83 387 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 SPATA7Q9P0W8 599 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 SLCO1B1Q9Y6L6 691 aa17.21■□□□□ 0.35
CLDND1-204ENST00000394185 TRBV23OR9-2A0A075B6M9 112 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 AQP12BA6NM10 295 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 SCAMP2O15127 329 aaKnown RBP17.21■□□□□ 0.34
CLDND1-204ENST00000394185 MYO1DO94832 1006 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 MC1RQ01726 317 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 CYP51A1Q16850 503 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 MTX3Q5HYI7 312 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 ZNF551Q7Z340 670 aaPredicted RBP17.21■□□□□ 0.34
CLDND1-204ENST00000394185 AQP12AQ8IXF9 295 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 FAM9CQ8IZT9 166 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 FAM160A2Q8N612 972 aaPredicted RBP17.21■□□□□ 0.34
CLDND1-204ENST00000394185 TOE1Q96GM8 510 aaKnown RBP17.21■□□□□ 0.34
CLDND1-204ENST00000394185 ITCHQ96J02 903 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 WDR92Q96MX6 357 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 CCM2LQ9NUG4 571 aaPredicted RBP17.21■□□□□ 0.34
CLDND1-204ENST00000394185 KNL1Q8NG31 2342 aa17.21■□□□□ 0.34
CLDND1-204ENST00000394185 GON4LQ3T8J9 2241 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 A0A096LPI6 279 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 RFXANKO14593 260 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 KLK1P06870 262 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 HOXB3P14651 431 aaPredicted RBP17.2■□□□□ 0.34
CLDND1-204ENST00000394185 PKLRP30613 574 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 HSD17B2P37059 387 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 LAPTM5Q13571 262 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 GLYATQ6IB77 296 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 GALNT18Q6P9A2 607 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 SLC22A18ASQ8N1D0 253 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 ZNF687Q8N1G0 1237 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 TMEM145Q8NBT3 493 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 ABHD11Q8NFV4 315 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 OR2A1Q8NGT9 310 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 RLN3Q8WXF3 142 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 CPPED1Q9BRF8 314 aaPredicted RBP17.2■□□□□ 0.34
CLDND1-204ENST00000394185 KAT8Q9H7Z6 458 aaKnown RBP17.2■□□□□ 0.34
CLDND1-204ENST00000394185 WASH6PQ9NQA3 447 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 SPHK1Q9NYA1 384 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 DTNAQ9Y4J8 743 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 PCDHB3Q9Y5E6 796 aa17.2■□□□□ 0.34
CLDND1-204ENST00000394185 FAM149AA5PLN7 773 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 RTCAO00442 366 aaKnown RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 LCMT2O60294 686 aaKnown RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 MT-ND1P03886 318 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 HOXC4P09017 264 aaPredicted RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 IL9P15248 144 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 PIK3CBP42338 1070 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 ZNF385BQ569K4 471 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 TBCELQ5QJ74 424 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 Q6ZSR6 202 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 TICAM1Q8IUC6 712 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 MMP21Q8N119 569 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 ZNF548Q8NEK5 533 aaPredicted RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 OR2T12Q8NG77 320 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 OR13H1Q8NG92 308 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 PPWD1Q96BP3 646 aaKnown RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 METTL2AQ96IZ6 378 aaKnown RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 TRIM15Q9C019 465 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 RMND5AQ9H871 391 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 INVSQ9Y283 1065 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 LRCH1Q9Y2L9 728 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 ERN1O75460 977 aaKnown RBP17.19■□□□□ 0.34
CLDND1-204ENST00000394185 RASGRP1O95267 797 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 STATHP02808 62 aa17.19■□□□□ 0.34
CLDND1-204ENST00000394185 PEBP1P30086 187 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms