RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PSMD10O75832 226 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ASPAP45381 313 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF84P51523 738 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF460Q14592 562 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ZACNQ401N2 412 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 KCNIP4Q6PIL6 250 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 USP51Q70EK9 711 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 GLYATL1Q969I3 302 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ITPAQ9BY32 194 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PRDM12Q9H4Q4 367 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 FOLH1BQ9HBA9 442 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 KCNIP1Q9NZI2 227 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PRKYO43930 277 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 OXTRP30559 389 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ETV6P41212 452 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RAB4BP61018 213 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 CD83Q01151 205 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 FOXM1Q08050 763 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 MALLQ13021 153 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 TOR1AIP1Q5JTV8 583 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PXKQ7Z7A4 578 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 LRRC52Q8N7C0 313 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ZMIZ2Q8NF64 920 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 KCNMB3Q9NPA1 279 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 UCKL1Q9NWZ5 548 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RBMX2Q9Y388 322 aaKnown RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 MAP1BP46821 2468 aaKnown RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 MEIS2O14770 477 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RPL13AP40429 203 aaKnown RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PSMD8P48556 350 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 MXD1Q05195 221 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 C9orf57Q5W0N0 161 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PLPPR4Q7Z2D5 763 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RDH12Q96NR8 316 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ARMC1Q9NVT9 282 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 LMTK2Q8IWU2 1503 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 CNTNAP1P78357 1384 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ATP6AP2O75787 350 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 GNRHRP30968 328 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 SLC22A10Q63ZE4 541 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 KIAA0907Q7Z7F0 614 aaPredicted RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 CBR4Q8N4T8 237 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 EXOSC8Q96B26 276 aaKnown RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 CCDC120Q96HB5 630 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RIMKLBQ9ULI2 386 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 LRRC42Q9Y546 428 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 CXCR6O00574 342 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PRPS1L1P21108 318 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PRKXP51817 358 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PLGLB1Q02325 96 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RAB35Q15286 201 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 NTRK2Q16620 822 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 TMEM69Q5SWH9 247 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 BBS12Q6ZW61 710 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 NRSN1Q8IZ57 195 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PCTPQ9UKL6 214 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 MROH2AA6NES4 1674 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 SLC15A5A6NIM6 579 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 TOR1AO14656 332 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 LRRTM2O43300 516 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 NDST3O95803 873 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PAK4O96013 591 aaPredicted RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 IL1AP01583 271 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 FOXK1P85037 733 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RIN1Q13671 783 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ARL11Q969Q4 196 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 GAL3ST4Q96RP7 486 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 DCSTAMPQ9H295 470 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 SLC35F4A4IF30 521 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 MUSKO15146 869 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 VILLO15195 856 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 DECR1Q16698 335 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 EXOSC6Q5RKV6 272 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 MBOAT1Q6ZNC8 495 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 CAMKVQ8NCB2 501 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 RPLP0P6Q8NHW5 317 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 MRPS30Q9NP92 439 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 AQP12BA6NM10 295 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 CDH1P12830 882 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 HTD2P86397 168 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 DGKZQ13574 1117 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 TRIM74Q86UV6 250 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 TRIM73Q86UV7 250 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 TMEM126BQ8IUX1 230 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 AQP12AQ8IXF9 295 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 PLA2G15Q8NCC3 412 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 IL12RB2Q99665 862 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 SLC28A3Q9HAS3 691 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 EXOSC1Q9Y3B2 195 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 FOXR2Q6PJQ5 311 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 FKBP10Q96AY3 582 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 TGM7Q96PF1 710 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 FUCA2Q9BTY2 467 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms