RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 NDC1Q9BTX1 674 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 EFCAB11Q9BUY7 163 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 C1QTNF3Q9BXJ4 246 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 SPRTNQ9H040 489 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 STMN4Q9H169 189 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ACTR5Q9H9F9 607 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 MED4Q9NPJ6 270 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TXLNGQ9NUQ3 528 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CUEDC1Q9NWM3 386 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 IRAK4Q9NWZ3 460 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 MKS1Q9NXB0 559 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 FOXJ2Q9P0K8 574 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CPSF2Q9P2I0 782 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 COPG2Q9UBF2 871 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 MID2Q9UJV3 735 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CDC14AQ9UNH5 594 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 KLHL20Q9Y2M5 609 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ANGPTL3Q9Y5C1 460 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ACTL7BQ9Y614 415 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CELSR3Q9NYQ7 3312 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 EPG5Q9HCE0 2579 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 HYKKA2RU49 373 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 URADA6NGE7 173 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 GOLGA6L10A6NI86 522 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 C21orf140B9A014 251 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 H0YGG7 62 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 GOLGA8RI6L899 631 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 MEN1O00255 615 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 HAT1O14929 419 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 HCRTR1O43613 425 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 TLX3O43711 291 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 OR1F1O43749 312 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 LCMT2O60294 686 aaKnown RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PLIN3O60664 434 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 RAD1O60671 282 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 WFS1O76024 890 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ONECUT2O95948 504 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 RECKO95980 971 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 NTRK1P04629 796 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SBK3P0C264 359 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SLC35G6P0C7Q6 338 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 IMPDH1P20839 514 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 AGXTP21549 392 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 RORAP35398 523 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 HNF4AP41235 474 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 GCGRP47871 477 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SCTRP47872 440 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 AGTR2P50052 363 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 UCNP55089 124 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 VSX2P58304 361 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ARF3P61204 181 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 IRF8Q02556 426 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF844Q08AG5 666 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PWP1Q13610 501 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 FAM53BQ14153 422 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 NDUFA9Q16795 377 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 MUM1Q2TAK8 710 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PRTGQ2VWP7 1150 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 DEFB110Q30KQ9 67 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 C18orf21Q32NC0 220 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 XKR6Q5GH73 641 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 CATSPEREQ5SY80 951 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 CEP85LQ5SZL2 805 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 C10orf62Q5T681 223 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 BROXQ5VW32 411 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 LIPJQ5W064 366 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 FRMPD2BQ6IN97 320 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PRMT9Q6P2P2 845 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 TMIGD1Q6UXZ0 262 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF517Q6ZMY9 492 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 TIPARPQ7Z3E1 657 aaKnown RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 TMPRSS11BQ86T26 416 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ZFAND4Q86XD8 727 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SRRM1Q8IYB3 904 aaKnown RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 CACNA2D3Q8IZS8 1091 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 DSELQ8IZU8 1212 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 IL22RA1Q8N6P7 574 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 TEX9Q8N6V9 391 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PTGR2Q8N8N7 351 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 BANPQ8N9N5 519 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SNX31Q8N9S9 440 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 MFSD9Q8NBP5 474 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SLC13A3Q8WWT9 602 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 NKD1Q969G9 470 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ESAMQ96AP7 390 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 KIAA1143Q96AT1 154 aaPredicted RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 CLIP3Q96DZ5 547 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PHF21BQ96EK2 531 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 RUFY1Q96T51 708 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 NTMT1Q9BV86 223 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 GPR87Q9BY21 358 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 IQCGQ9H095 443 aaKnown RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 SSU72Q9NP77 194 aaKnown RBP6.46□□□□□ -1.38
UBBP1-201ENST00000392399 LHX9Q9NQ69 397 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ADGRE2Q9UHX3 823 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 ZFP69BQ9UJL9 534 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 KCND3Q9UK17 655 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 STK38LQ9Y2H1 464 aa6.46□□□□□ -1.38
UBBP1-201ENST00000392399 PLLPQ9Y342 182 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms