RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 NOXRED1Q6NXP6 359 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 RIPOR1Q6ZS17 1223 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ZNF438Q7Z4V0 828 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 C17orf82Q86X59 251 aaPredicted RBP25.71■■□□□ 1.71
MSX1-201ENST00000382723 C1orf52Q8N6N3 182 aaKnown RBP25.71■■□□□ 1.71
MSX1-201ENST00000382723 PROKR1Q8TCW9 393 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 RCN3Q96D15 328 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 KLHL25Q9H0H3 589 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 NMRK1Q9NWW6 199 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ASIC5Q9NY37 505 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ZIM2Q9NZV7 527 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ENTPD2Q9Y5L3 495 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 TRBC2A0A5B9 178 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 OR5K3A6NET4 321 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 DNAJC8O75937 253 aaPredicted RBP25.71■■□□□ 1.71
MSX1-201ENST00000382723 SERPIND1P05546 499 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 HRH2P25021 359 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 BCL6P41182 706 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 KCNJ2P63252 427 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 DUOXA1Q1HG43 343 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 HLA-BQ31612 363 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ARMC6Q6NXE6 501 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 SPESP1Q6UW49 350 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 PPM1MQ96MI6 270 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 NPAS2Q99743 824 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 RTKNQ9BST9 563 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ACTL8Q9H568 366 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ADGRE2Q9UHX3 823 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 LAMA1P25391 3075 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 ZW10O43264 779 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 UBXN7O94888 489 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 MAGP20916 626 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 PTX3P26022 381 aaPredicted RBP25.7■■□□□ 1.7
MSX1-201ENST00000382723 MAPK1P28482 360 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 PPM1FP49593 454 aaPredicted RBP25.7■■□□□ 1.7
MSX1-201ENST00000382723 PPP1CAP62136 330 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 SLC25A3Q00325 362 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 C6orf132Q5T0Z8 1188 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 ZNF425Q6IV72 752 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 GATAD2AQ86YP4 633 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 NUDT8Q8WV74 236 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 CHTF18Q8WVB6 975 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 SERPINI1Q99574 410 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 IL21RQ9HBE5 538 aa25.7■■□□□ 1.7
MSX1-201ENST00000382723 ANKRD28O15084 1053 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 STATHP02808 62 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 TACR1P25103 407 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 IL12AP29459 219 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 NUDT2P50583 147 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 CYP4F3Q08477 520 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 VPS26BQ4G0F5 336 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 SLC25A23Q9BV35 468 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.69■■□□□ 1.7
MSX1-201ENST00000382723 RUVBL1Q9Y265 456 aaKnown RBP25.69■■□□□ 1.7
MSX1-201ENST00000382723 PCDHGA2Q9Y5H1 932 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 TP53BP1Q12888 1972 aaPredicted RBP25.69■■□□□ 1.7
MSX1-201ENST00000382723 MYO1DO94832 1006 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 GIMD1P0DJR0 217 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 SDC1P18827 310 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 EPHA8P29322 1005 aaPredicted RBP25.69■■□□□ 1.7
MSX1-201ENST00000382723 CORO7P57737 925 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 STX5Q13190 355 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 MMEL1Q495T6 779 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 SPIN4Q56A73 249 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 BLOC1S3Q6QNY0 202 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 PAQR7Q86WK9 346 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 PARP9Q8IXQ6 854 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 TBC1D19Q8N5T2 526 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 TSSK3Q96PN8 268 aa25.69■■□□□ 1.7
MSX1-201ENST00000382723 A0A1B0GTQ1 180 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 RHPN2P1A8MT19 583 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 TBX6O95947 436 aaPredicted RBP25.68■■□□□ 1.7
MSX1-201ENST00000382723 PRPS2P11908 318 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 PVRP15151 417 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 SERPINB1P30740 379 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 LSSP48449 732 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 POLR2JP52435 117 aaKnown RBP25.68■■□□□ 1.7
MSX1-201ENST00000382723 KCNK10P57789 538 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 F2RL3Q96RI0 385 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 DPY30Q9C005 99 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 UCK1Q9HA47 277 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 EVA1BQ9NVM1 165 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 RNF215Q9Y6U7 377 aa25.68■■□□□ 1.7
MSX1-201ENST00000382723 FBP2O00757 339 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 CAPN3P20807 821 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 HOXD12P35452 270 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 ZFP36L2P47974 494 aaKnown RBP25.67■■□□□ 1.7
MSX1-201ENST00000382723 RAE1P78406 368 aaKnown RBP25.67■■□□□ 1.7
MSX1-201ENST00000382723 SLC5A12Q1EHB4 618 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 TRIM61Q5EBN2 209 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 KRTCAP2Q8N6L1 136 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 ARL10Q8N8L6 244 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 CEP76Q8TAP6 659 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 FCRL1Q96LA6 429 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 MS4A8Q9BY19 250 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 GAREM1Q9H706 876 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 LRIT1Q9P2V4 623 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 FAM234BA2RU67 622 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 LILRA5A6NI73 299 aa25.67■■□□□ 1.7
MSX1-201ENST00000382723 MYF5P13349 255 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms