RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
RPAIN-202ENST00000381208 TRIM54Q9BYV2 358 aa12.32□□□□□ -0.44
RPAIN-202ENST00000381208 RNF32Q9H0A6 362 aa12.32□□□□□ -0.44
RPAIN-202ENST00000381208 IARS2Q9NSE4 1012 aaKnown RBP12.32□□□□□ -0.44
RPAIN-202ENST00000381208 STOX2Q9P2F5 926 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-202ENST00000381208 ASIC3Q9UHC3 531 aa12.32□□□□□ -0.44
RPAIN-202ENST00000381208 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
RPAIN-202ENST00000381208 CORO1CQ9ULV4 474 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-202ENST00000381208 MRPS2Q9Y399 296 aaKnown RBP12.32□□□□□ -0.44
RPAIN-202ENST00000381208 A0A0A6YYC8 382 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-202ENST00000381208 I3L1I5 382 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-202ENST00000381208 DNALI1O14645 258 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-202ENST00000381208 HAT1O14929 419 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 C8orf89P0DMQ9 161 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 IL10P22301 178 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 SOX11P35716 441 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 TBPL1P62380 186 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 SKP1P63208 163 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 MPP1Q00013 466 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 NIPAL1Q6NVV3 410 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 TMEM205Q6UW68 189 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 LINC00696Q6ZRV3 163 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 LAPTM4BQ86VI4 370 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 CNTN4Q8IWV2 1026 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 DTWD1Q8N5C7 304 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 TBC1D19Q8N5T2 526 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 GRHL3Q8TE85 626 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 ATL1Q8WXF7 558 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 C8orf44Q96CB5 159 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 ZNF700Q9H0M5 742 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 ERRFI1Q9UJM3 462 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-202ENST00000381208 MKL2Q9ULH7 1088 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 SNX12Q9UMY4 172 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 MDC1Q14676 2089 aaKnown RBP12.31□□□□□ -0.44
RPAIN-202ENST00000381208 NBPF19A0A087WUL8 3843 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 SVILO95425 2214 aa12.31□□□□□ -0.44
RPAIN-202ENST00000381208 KLHL18O94889 574 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 AGTR2P50052 363 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 AP1S2P56377 157 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 ILF2Q12905 390 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 CAPN13Q6MZZ7 669 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 AGTRAPQ6RW13 159 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 LCTLQ6UWM7 567 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SYDE1Q6ZW31 735 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 ZC3H7AQ8IWR0 971 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SUN3Q8TAQ9 357 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 BRIX1Q8TDN6 353 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 ANKHQ9HCJ1 492 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 PTGFRNQ9P2B2 879 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 PDE10AQ9Y233 779 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 NTNG1Q9Y2I2 539 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 CSAG2Q9Y5P2 127 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SLC35G6P0C7Q6 338 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 TNFSF10P50591 281 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 IL2P60568 153 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 CSNK1G2P78368 415 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 EEF1A2Q05639 463 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 DHX9Q08211 1270 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 MORF4L2Q15014 288 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 ABHD17BQ5VST6 288 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 DUPD1Q68J44 220 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 TMEM214Q6NUQ4 689 aaKnown RBP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 ASPGQ86U10 573 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 AGGF1Q8N302 714 aaeCLIP12.3□□□□□ -0.44
RPAIN-202ENST00000381208 GPATCH11Q8N954 259 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 OR1N1Q8NGS0 311 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 EEF1AKMT1Q8WVE0 214 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 PSMF1Q92530 271 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 CERS2Q96G23 380 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SLX1AQ9BQ83 275 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SARGQ9BW04 601 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SGPP1Q9BX95 441 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 OLAHQ9NV23 265 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 SLC22A7Q9Y694 548 aa12.3□□□□□ -0.44
RPAIN-202ENST00000381208 DIDO1Q9BTC0 2240 aaKnown RBP12.29□□□□□ -0.44
RPAIN-202ENST00000381208 A0A1B0GUH1 482 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 E2F3O00716 465 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 CDK2AP1O14519 115 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 NDC80O14777 642 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 P2RX6O15547 441 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 CRYABP02511 175 aaKnown RBP12.29□□□□□ -0.44
RPAIN-202ENST00000381208 ENO2P09104 434 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-202ENST00000381208 BCL6P41182 706 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 CCR8P51685 355 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 NAE1Q13564 534 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 HERC3Q15034 1050 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 PCOLCEQ15113 449 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 MINDY4Q4G0A6 757 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 FAM45BPQ6NSW5 357 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 PAQR3Q6TCH7 311 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 VN1R4Q7Z5H5 301 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 STRA8Q7Z7C7 330 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 PLD3Q8IV08 490 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 ABHD11Q8NFV4 315 aa12.29□□□□□ -0.44
RPAIN-202ENST00000381208 OR51Q1Q8NH59 317 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms