RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ZZZ3Q8IYH5 903 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 CLYBLQ8N0X4 340 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 LGI4Q8N135 537 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 PWWP2AQ96N64 755 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 CHP1Q99653 195 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 REPIN1Q9BWE0 567 aaKnown RBP16.29■□□□□ 0.2
HMGN1-203ENST00000380748 SLC24A3Q9HC58 644 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 USP27XA6NNY8 438 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 NDC80O14777 642 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 PJA2O43164 708 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 EZRP15311 586 aaKnown RBP16.28■□□□□ 0.2
HMGN1-203ENST00000380748 TFEBP19484 476 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 CTNNA2P26232 953 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 RPA3P35244 121 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-203ENST00000380748 CCNFP41002 786 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 MEOX1P50221 254 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 NR0B1P51843 470 aaKnown RBP16.28■□□□□ 0.2
HMGN1-203ENST00000380748 TAS2R50P59544 299 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 TSTA3Q13630 321 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-203ENST00000380748 PTK6Q13882 451 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 PARP6Q2NL67 630 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 EMC4Q5J8M3 183 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 TMEM198Q66K66 360 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 PLD3Q8IV08 490 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 KIF2BQ8N4N8 673 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 OR4L1Q8NH43 312 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 OR51Q1Q8NH59 317 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 RMND5BQ96G75 393 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-203ENST00000380748 ZNF778Q96MU6 729 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 DNAJC7Q99615 494 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 CLEC4MQ9H2X3 399 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-203ENST00000380748 TAC3Q9UHF0 121 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 MRFAP1Q9Y605 127 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 ZNF407Q9C0G0 2248 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 COL6A5A8TX70 2615 aa16.28■□□□□ 0.2
HMGN1-203ENST00000380748 KIAA1324LA8MWY0 1029 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 H0YIG0 161 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 TXNDC9O14530 226 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 HAT1O14929 419 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 PDE9AO76083 593 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 NSA2O95478 260 aaKnown RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 ERGP11308 486 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 DGKQP52824 942 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 ITGA8P53708 1063 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 USP10Q14694 798 aaKnown RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 NDUFA9Q16795 377 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 PTRHD1Q6GMV3 140 aaKnown RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 RPS19BP1Q86WX3 136 aaKnown RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 PRIMA1Q86XR5 153 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 POGLUT1Q8NBL1 392 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 WFDC11Q8NEX6 87 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 OR8K1Q8NGG5 319 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 OR52K1Q8NGK4 314 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 OR6P1Q8NGX9 317 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 NANOS1Q8WY41 292 aaKnown RBP16.27■□□□□ 0.2
HMGN1-203ENST00000380748 SMPDL3AQ92484 453 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 TSLPQ969D9 159 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 LPAR4Q99677 370 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 RBCK1Q9BYM8 510 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 SCN3AQ9NY46 2000 aa16.27■□□□□ 0.2
HMGN1-203ENST00000380748 STAB1Q9NY15 2570 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 PRMT5O14744 637 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 PRMT3O60678 531 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 PKMP14618 531 aaKnown RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 IL1RNP18510 177 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 CYB561P49447 251 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 SLC26A5P58743 744 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 ACTN3Q08043 901 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 SNTB1Q13884 538 aaKnown RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 ABRAXAS2Q15018 415 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 FASTKD1Q53R41 847 aaKnown RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 TSTD2Q5T7W7 516 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 ICE2Q659A1 982 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 ADCK2Q7Z695 626 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 LUZP1Q86V48 1076 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 SULF2Q8IWU5 870 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 MAGEC3Q8TD91 643 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 TMEM125Q96AQ2 219 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 FOPNLQ96NB1 174 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 TRIM45Q9H8W5 580 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 NHEJ1Q9H9Q4 299 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 PLSCR2Q9NRY7 297 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
HMGN1-203ENST00000380748 MARCH4Q9P2E8 410 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
HMGN1-203ENST00000380748 ARHGEF33A8MVX0 844 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 SGK494L7N484 410 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 CDC123O75794 336 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-203ENST00000380748 COPS2P61201 443 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 RHAGQ02094 409 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 PRDX1Q06830 199 aaKnown RBP16.25■□□□□ 0.19
HMGN1-203ENST00000380748 NSDHLQ15738 373 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 ARHGAP11AQ6P4F7 1023 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 ACAD11Q709F0 780 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 OTOAQ7RTW8 1153 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 FAM71DQ8N9W8 422 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 OR52N2Q8NGI0 321 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 OR5M3Q8NGP4 307 aa16.25■□□□□ 0.19
HMGN1-203ENST00000380748 OR9A1PQ8NGU1 263 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms