RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR6C74A6NCV1 312 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 LGALS8O00214 317 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 TNFSF9P41273 254 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 GLO1Q04760 184 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 SREBF2Q12772 1141 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 TNK1Q13470 666 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 OPCMLQ14982 345 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 TSTQ16762 297 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 GPAT4Q86UL3 456 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ACO2Q99798 780 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 DDX31Q9H8H2 851 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 TCF7L1Q9HCS4 588 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 C11orf16Q9NQ32 467 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 PCDHGA2Q9Y5H1 932 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 MICAL3Q7RTP6 2002 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 H7C0S8 307 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF197O14709 1029 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 CBX7O95931 251 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 CKMT1AP12532 417 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 HOXB6P17509 224 aaKnown RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 GLUD2P49448 558 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 ARSDP51689 593 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 BCL2L15Q5TBC7 163 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF227Q86WZ6 799 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 DHRS4Q9BTZ2 278 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 ELP3Q9H9T3 547 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 WRAP73Q9P2S5 460 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 TNFSF13BQ9Y275 285 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 FXYD6-FXYD2A0A087WZ82 144 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 NDUFS3O75489 264 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 TPH1P17752 444 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 KCNJ10P78508 379 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 LCN8Q6JVE9 175 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 RPL13AP3Q6NVV1 102 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 FAM183BPQ6ZVS7 135 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 USP51Q70EK9 711 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 CELF6Q96J87 481 aaKnown RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 CMTM3Q96MX0 182 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 LRFN5Q96NI6 719 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 EGFL8Q99944 293 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 SPON2Q9BUD6 331 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 SLIRPQ9GZT3 109 aaKnown RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 MS4A7Q9GZW8 240 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-202ENST00000378161 FXYD6Q9H0Q3 95 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 NT5DC2Q9H857 520 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 BTBD17A6NE02 478 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 B4DXG7 233 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 SPATA31C2B4DYI2 1134 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 HRGP04196 525 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 FHP07954 510 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 HNF1AP20823 631 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 CDK5R2Q13319 367 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 RIN1Q13671 783 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 MSANTD2Q6P1R3 559 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 WDR48Q8TAF3 677 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 ING5Q8WYH8 240 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 C1GALT1C1Q96EU7 318 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 TRIM54Q9BYV2 358 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 SH3BP4Q9P0V3 963 aa11.43□□□□□ -0.58
NPHP4-202ENST00000378161 DBX1A6NMT0 343 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 NEDD8-MDP1E9PL57 170 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SDC3O75056 442 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 VTNP04004 478 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 INSRRP14616 1297 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 FPR3P25089 353 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CREMQ03060 361 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PRKG2Q13237 762 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 KCNC3Q14003 757 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CSHL1Q14406 222 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 GK2Q14410 553 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 FAM122BQ7Z309 247 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 DEFB106AQ8N104 65 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 KLHL36Q8N4N3 616 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PAPD5Q8NDF8 572 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SLC35B2Q8TB61 432 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF675Q8TD23 568 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 TMEM41AQ96HV5 264 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 B3GNT5Q9BYG0 378 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 C20orf27Q9GZN8 174 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ANKRD19PQ9H560 264 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 GALNT9Q9HCQ5 603 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CLN6Q9NWW5 311 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SAMHD1Q9Y3Z3 626 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 DNMT3AQ9Y6K1 912 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SUPT3HB4E1H0 165 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 MRPS14O60783 128 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SPCS3P61009 180 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SNRPEP62304 92 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CNTN2Q02246 1040 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SNTB1Q13884 538 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CDNFQ49AH0 187 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 MRNIPQ6NTE8 343 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms