RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PRR11Q96HE9 360 aaPredicted RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 CNDP2Q96KP4 475 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 RPL10LQ96L21 214 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 KCNA7Q96RP8 456 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 CYP2S1Q96SQ9 504 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 BCL7BQ9BQE9 202 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 NEUROD4Q9HD90 331 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 C14orf105Q9NVL8 296 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 WNT9AO14904 365 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 MAGEB3O15480 346 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 MYF6P23409 242 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 DCDC1P59894 354 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 RAPSNQ13702 412 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 KCNC3Q14003 757 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 OLFML2AQ68BL7 652 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 FRRS1Q6ZNA5 592 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 AMZ2Q86W34 360 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 GALNT13Q8IUC8 556 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 C17orf50Q8WW18 174 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 NCSTNQ92542 709 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 CLIP3Q96DZ5 547 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 PSKH2Q96QS6 385 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ZNF224Q9NZL3 707 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 RIMKLBQ9ULI2 386 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 CLEC4AQ9UMR7 237 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 NENFQ9UMX5 172 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ARID2Q68CP9 1835 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TRIP12Q14669 1992 aaPredicted RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 IGKV6-21A0A0C4DH24 114 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 CLDN4O14493 209 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ENTPD6O75354 484 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 S1PR4O95977 384 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 IFNA7P01567 189 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 CD2P06729 351 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 PRKACGP22612 351 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ITPKBP27987 946 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 RING1Q06587 406 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 RBBP4Q09028 425 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 MAB21L1Q13394 359 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TSTQ16762 297 aaKnown RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 SYCE2Q6PIF2 218 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 RPS27LQ71UM5 84 aaKnown RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 C2orf73Q8N5S3 287 aaPredicted RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 KDM1BQ8NB78 822 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 FAM46DQ8NEK8 389 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ZMIZ2Q8NF64 920 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 OR10G6Q8NH81 332 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 MGME1Q9BQP7 344 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TRIM2Q9C040 744 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 PDLIM7Q9NR12 457 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ARMC1Q9NVT9 282 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 MGAT4BQ9UQ53 548 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3DA0A087WVF3 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3IA0A087WXS9 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3EA0A087X179 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3KA0A087X1G2 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 A0A1W2PQ72 361 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3FA6NER0 549 aaPredicted RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3LB9A6J9 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 DLGAP1O14490 977 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 SNAPC5O75971 98 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 SLITRK5O94991 958 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 CHRNA1P02708 482 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3HP0C7X1 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ATP1B2P14415 290 aaPredicted RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 GGT5P36269 586 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 NUDT6P53370 316 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 PUDPQ08623 228 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 GPR17Q13304 367 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 GANABQ14697 944 aaKnown RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 CYBRD1Q53TN4 286 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 FAM182AQ5T1J6 154 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 IDNKQ5T6J7 187 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3GQ6DHY5 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3CQ6IPX1 549 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 KIAA1324Q6UXG2 1013 aaKnown RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 TBC1D3Q8IZP1 549 aaPredicted RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 CLIP4Q8N3C7 705 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 DCAF4L2Q8NA75 395 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ZNF563Q8TA94 476 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 LRRC20Q8TCA0 184 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 KAT2AQ92830 837 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 RGMAQ96B86 450 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 SPACA7Q96KW9 195 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ZNF354BQ96LW1 612 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 ZFP3Q96NJ6 502 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 TRNT1Q96Q11 434 aaKnown RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 WRAP53Q9BUR4 548 aaKnown RBP8.14□□□□□ -1.11
VPS36-201ENST00000378060 GIMAP2Q9UG22 337 aa8.14□□□□□ -1.11
VPS36-201ENST00000378060 SZT2Q5T011 3432 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FRMPD3Q5JV73 1810 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ARL6IP5O75915 188 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 MATN4O95460 622 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ITGB1P05556 798 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CHRM5P08912 532 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 CCR8P51685 355 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 AKR1D1P51857 326 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PLA2G16P53816 162 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 MEDAGQ5VYS4 303 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 1322.9 ms