RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 NATD1Q8N6N6 113 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 TMIEQ8NEW7 156 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 FAM81AQ8TBF8 368 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 GIPC3Q8TF64 312 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 COL21A1Q96P44 957 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 SLC38A2Q96QD8 506 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 SLC30A3Q99726 388 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 REEP4Q9H6H4 257 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 PRMT3O60678 531 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 PRLP01236 227 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 TIA1P31483 386 aaKnown RBP eCLIP14.02□□□□□ -0.172e-7■□□□□ 8.2
TCOF1-202ENST00000377797 CCDC92Q53HC0 331 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-202ENST00000377797 DCST1Q5T197 706 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 PRSS58Q8IYP2 241 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 C3orf30Q96M34 536 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 Q96MT0 163 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 CNPPD1Q9BV87 410 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 C1QTNF1Q9BXJ1 281 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 FANCEQ9HB96 536 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 ANKHQ9HCJ1 492 aa14.02□□□□□ -0.17
TCOF1-202ENST00000377797 KRT87PA6NCN2 255 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 E7EQ34 232 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CR2P20023 1033 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CAPN3P20807 821 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 GSTM5P46439 218 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 SLC5A9Q2M3M2 681 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 GPR107Q5VW38 600 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 B3GNT6Q6ZMB0 384 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 PTCHD4Q6ZW05 846 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 JPH3Q8WXH2 748 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 KCNH6Q9H252 994 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CTPS2Q9NRF8 586 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 LOC100506127A0A0U1RQW1 187 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ARHGEF33A8MVX0 844 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CAPN14A8MX76 684 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 HTRA2O43464 458 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 INHBCP55103 352 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CDK6Q00534 326 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 MTAPQ13126 283 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 C1orf61Q13536 156 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CDKL4Q5MAI5 379 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ERMP1Q7Z2K6 904 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 MINDY1Q8N5J2 469 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CAMKK1Q8N5S9 505 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 TTC29Q8NA56 475 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF483Q8TF39 744 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 MYDGFQ969H8 173 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CALML5Q9NZT1 146 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ATXN10Q9UBB4 475 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 INTS6Q9UL03 887 aaKnown RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 H7C0S8 307 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CAPN5O15484 640 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 AOAHP28039 575 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 SERPINB1P30740 379 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CAPGP40121 348 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 IL12RB1P42701 662 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CAPZA2P47755 286 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 DAG1Q14118 895 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 RNF220Q5VTB9 566 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 KIAA1161Q6NSJ0 714 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 MFSD6LQ8IWD5 586 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 TEX47Q8TBZ9 253 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ISL2Q96A47 359 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 PDLIM5Q96HC4 596 aaKnown RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ZSWIM3Q96MP5 696 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 RDH14Q9HBH5 336 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 GTF2A1LQ9UNN4 478 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 KLHL33A6NCF5 533 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 GLOD5A6NK44 160 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 FADS2P1A8MWK0 482 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 GALK1P51570 392 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CRISP3P54108 245 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CLDN8P56748 225 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 PTSQ03393 145 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF542PQ5EBM4 170 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF730Q6ZMV8 503 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 DDHD1Q8NEL9 900 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 OR5K1Q8NHB7 308 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 SETD7Q8WTS6 366 aaKnown RBP14.01□□□□□ -0.17
TCOF1-202ENST00000377797 TMBIM1Q969X1 311 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 ZUFSPQ96AP4 578 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 CFHR5Q9BXR6 569 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 HRASLS2Q9NWW9 162 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 KLHL42Q9P2K6 505 aa14.01□□□□□ -0.17
TCOF1-202ENST00000377797 DPPA5A6NC42 116 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 PRORSD1PA6NEY8 169 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 ETS2P15036 469 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 LSM3P62310 102 aaKnown RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 FBXO43Q4G163 708 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 FAM91A1Q658Y4 838 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 CEACAM20Q6UY09 585 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 LARP4Q71RC2 724 aaKnown RBP eCLIP14□□□□□ -0.171e-7■□□□□ 8.6
TCOF1-202ENST00000377797 FAM20CQ8IXL6 584 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 PIK3C3Q8NEB9 887 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 FAM110BQ8TC76 370 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 TSACCQ96A04 125 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms