RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 JRKO75564 520 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 TTC4O95801 387 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 SERPINA7P05543 415 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 SLC26A3P40879 764 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 RGS4P49798 205 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 KCNK10P57789 538 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 EEF1A2Q05639 463 aaKnown RBP18.17■□□□□ 0.5
CBWD3-204ENST00000377349 SPANXN3Q5MJ09 141 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 RBM20Q5T481 1227 aaKnown RBP18.17■□□□□ 0.5
CBWD3-204ENST00000377349 MBOAT1Q6ZNC8 495 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 FJX1Q86VR8 437 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 PDIK1LQ8N165 341 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 MYO1HQ8N1T3 1032 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 SIRT6Q8N6T7 355 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 C2CD4AQ8NCU7 369 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-204ENST00000377349 EEF1AKMT1Q8WVE0 214 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 HAS2Q92819 552 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 RELTQ969Z4 430 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 MVB12AQ96EY5 273 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 OR2A5Q96R48 311 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 NAPGQ99747 312 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-204ENST00000377349 CCDC177Q9NQR7 707 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-204ENST00000377349 TAS2R13Q9NYV9 303 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 ADAMTS6Q9UKP5 1117 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 CCDC168Q8NDH2 2452 aa18.17■□□□□ 0.5
CBWD3-204ENST00000377349 LOC102723996A0A087X1L8 192 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 E7ENX8 843 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 HAT1O14929 419 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 UQCRHP07919 91 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 ELK3P41970 407 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 EMP2P54851 167 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 TBPL1P62380 186 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 ARG2P78540 354 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 TAP2Q03519 686 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 PRDX1Q06830 199 aaKnown RBP18.16■□□□□ 0.5
CBWD3-204ENST00000377349 PCOLCEQ15113 449 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 ANKMY2Q8IV38 441 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 IGDCC3Q8IVU1 814 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 SRRM1Q8IYB3 904 aaKnown RBP18.16■□□□□ 0.5
CBWD3-204ENST00000377349 NR4A3Q92570 626 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 MARVELD3Q96A59 401 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 MMABQ96EY8 250 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-204ENST00000377349 LINGO1Q96FE5 620 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 CERS2Q96G23 380 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 TGIF2Q9GZN2 237 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 KLHL42Q9P2K6 505 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 TRPC4Q9UBN4 977 aa18.16■□□□□ 0.5
CBWD3-204ENST00000377349 H7BY64 318 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 P2RX6O15547 441 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 TTI1O43156 1089 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ANXA5P08758 320 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 SAT1P21673 171 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 FDXRP22570 491 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 IMPA1P29218 277 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 PGGT1BP53609 377 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 CDKN2DP55273 166 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 PDAP1Q13442 181 aaKnown RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 INAQ16352 499 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 SYT16Q17RD7 645 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 FAAH2Q6GMR7 532 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ZC3H7AQ8IWR0 971 aaKnown RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 SHISA5Q8N114 240 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 MCOLN3Q8TDD5 553 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 PRAP1Q96NZ9 151 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 UNKQ9C0B0 810 aaKnown RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ATG10Q9H0Y0 220 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 C14orf105Q9NVL8 296 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 SAR1BQ9Y6B6 198 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ANKRD17O75179 2603 aaKnown RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 TRAV17A0A0B4J275 112 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 A0A1B0GUH1 482 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ARHGAP10A1A4S6 786 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 DYTNA2CJ06 578 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 GFYI3L273 518 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 HNRNPRO43390 633 aaKnown RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 BMP10O95393 424 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 F10P00742 488 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ITGAMP11215 1152 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 EZRP15311 586 aaKnown RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 PAFAH1B1P43034 410 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ITGA8P53708 1063 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 SP5Q6BEB4 398 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 PAQR3Q6TCH7 311 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 TMEM205Q6UW68 189 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 CYHR1Q6ZMK1 362 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 FBXO15Q8NCQ5 510 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 MAGEB10Q96LZ2 347 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-204ENST00000377349 NAT9Q9BTE0 207 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 ZNF700Q9H0M5 742 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 RIC8BQ9NVN3 520 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 PYCARDQ9ULZ3 195 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 CDC14AQ9UNH5 594 aa18.15■□□□□ 0.5
CBWD3-204ENST00000377349 A0A0A6YYC8 382 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-204ENST00000377349 I3L1I5 382 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-204ENST00000377349 WDPCPO95876 746 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 ABATP80404 500 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 SRSF11Q05519 484 aaKnown RBP18.14■□□□□ 0.49
CBWD3-204ENST00000377349 MORF4L2Q15014 288 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 MFSD4BQ5TF39 518 aa18.14■□□□□ 0.49
CBWD3-204ENST00000377349 GARNL3Q5VVW2 1013 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms