RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TMEM150AQ86TG1 271 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 CATSPER1Q8NEC5 780 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 MIPOL1Q8TD10 442 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 CD200R1Q8TD46 325 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 CCT7Q99832 543 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 RIBC2Q9H4K1 309 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC40A1Q9NP59 571 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ANAPC2Q9UJX6 822 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 PCDHGA4Q9Y5G9 962 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ARHGEF33A8MVX0 844 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 MAGEB17A8MXT2 336 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ERVK-8P63133 956 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 PLGLB1Q02325 96 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 PTGR1Q14914 329 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 NSDHLQ15738 373 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 NEK5Q6P3R8 708 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 Q6ZNB5 142 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 COMMD2Q86X83 199 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ZDHHC13Q8IUH4 622 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 SAMD14Q8IZD0 417 aaPredicted RBP8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 EID3Q8N140 333 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ZNF248Q8NDW4 579 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 OR52J3Q8NH60 311 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 DEPDC7Q96QD5 511 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 INSM2Q96T92 566 aaPredicted RBP8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ARNT2Q9HBZ2 717 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 PRTFDC1Q9NRG1 225 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ACTR10Q9NZ32 417 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 ADGRE2Q9UHX3 823 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 NENFQ9UMX5 172 aa8.17□□□□□ -1.1
CRNKL1-202ENST00000377340 SPTBP11277 2137 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 KIR2DS5A0A0G2JLQ3 304 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 A0A0G2JNG1 304 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 KIR2DS3K7RE56 304 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC26A3P40879 764 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 TAS2R41P59536 307 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 IL5RAQ01344 420 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SLAMF1Q13291 335 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 KIR2DS5Q14953 304 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 GSTA3Q16772 222 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ZNF678Q5SXM1 525 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 USP30Q70CQ3 517 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC29A4Q7RTT9 530 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 AMIGO2Q86SJ2 522 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 LUZP2Q86TE4 346 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ISCA2Q86U28 154 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 DCP2Q8IU60 420 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ZNF786Q8N393 782 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 TADA1Q96BN2 335 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 CLPTM1LQ96KA5 538 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 CNBD2Q96M20 576 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 C5AR2Q9P296 337 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ANKMY1Q9P2S6 941 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SHOX2O60902 331 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ERN1O75460 977 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 PRLP01236 227 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 NR2F6P10588 404 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 PRPS1L1P21108 318 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 FDXRP22570 491 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ITGA3P26006 1051 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 CASRP41180 1078 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 XKP51811 444 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 DIO3P55073 304 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 NRG3P56975 720 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 YPEL5P62699 121 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SPEM2Q0P670 501 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 GRM7Q14831 915 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 LARS2Q15031 903 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 NR0B2Q15466 257 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ALG11Q2TAA5 492 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ZIK1Q3SY52 487 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 MANEALQ5VSG8 457 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 OR2I1PQ8NGU4 316 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 CCL4L1Q8NHW4 92 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 FUBP1Q96AE4 644 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC35G5Q96KT7 338 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC39A3Q9BRY0 314 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 HDAC8Q9BY41 377 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 GIN1Q9NXP7 522 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SLC6A14Q9UN76 642 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 A0A0A6YYC8 382 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 E7EQ34 232 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 I3L1I5 382 aaPredicted RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 TGDSO95455 350 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 VNN2O95498 520 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 MPC1LP0DKB6 136 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 ATP6V1B1P15313 513 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 KPNB1Q14974 876 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 PCLAFQ15004 111 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 TRMT5Q32P41 509 aaKnown RBP8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 LRIT3Q3SXY7 679 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 TECRLQ5HYJ1 363 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SPANXN4Q5MJ08 99 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 WLSQ5T9L3 541 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 TEX26Q8N6G2 289 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 SCAIQ8N9R8 606 aa8.16□□□□□ -1.1
CRNKL1-202ENST00000377340 C11orf65Q8NCR3 313 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms