RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CSHL1Q14406 222 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 EFTUD2Q15029 972 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■■□ 24.5
CLCN6-203ENST00000376490 NDUFA9Q16795 377 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 SYT16Q17RD7 645 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 KIRREL2Q6UWL6 708 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 THOC6Q86W42 341 aaKnown RBP13.55□□□□□ -0.24
CLCN6-203ENST00000376490 SHISA5Q8N114 240 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 KCT2Q8NC54 265 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 ZNF740Q8NDX6 193 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 OR9A4Q8NGU2 314 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 SLC13A3Q8WWT9 602 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 NEIL2Q969S2 332 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 MVB12AQ96EY5 273 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 TSPAN17Q96FV3 270 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 EGFL8Q99944 293 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 DERL2Q9GZP9 239 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 DRC3Q9H069 523 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 EPN3Q9H201 632 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 ATP13A2Q9NQ11 1180 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 GPR83Q9NYM4 423 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 SLC22A14Q9Y267 594 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
CLCN6-203ENST00000376490 IGLV3-12A0A075B6K2 115 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 NCF1BA6NI72 391 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 NCF1CA8MVU1 366 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 OR1F1O43749 312 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 ZIC2O95409 532 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 IGHEP01854 428 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 TUBB4AP04350 444 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 NCF1P14598 390 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 CD1DP15813 335 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 STX2P32856 288 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 GRK3P35626 688 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 GDF5P43026 501 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 MAT1AQ00266 395 aaKnown RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 CDKL1Q00532 357 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 DSG2Q14126 1118 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 RBBP7Q16576 425 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 UBAP2Q5T6F2 1119 aaKnown RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 FRA10AC1Q70Z53 315 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 PRSS41Q7RTY9 318 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 ASPGQ86U10 573 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 GALNT16Q8N428 558 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 MFSD9Q8NBP5 474 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 CLEC1AQ8NC01 280 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 CAMKVQ8NCB2 501 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 MNS1Q8NEH6 495 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 SLC5A11Q8WWX8 675 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 MRRFQ96E11 262 aaKnown RBP13.54□□□□□ -0.24
CLCN6-203ENST00000376490 MOCOSQ96EN8 888 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 CRB3Q9BUF7 120 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 C3orf18Q9UK00 162 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 FBXL4Q9UKA2 621 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
CLCN6-203ENST00000376490 CTAGE15A4D2H0 777 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 PRPF4O43172 522 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLCN6-203ENST00000376490 CTAGE8P0CG41 777 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 IL1RNP18510 177 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 AVPR1BP47901 424 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 KCNC1P48547 511 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 HNMTP50135 292 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 EMP2P54851 167 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 RAB10P61026 200 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 OR4D1Q15615 310 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 ZKSCAN8Q15776 578 aaPredicted RBP13.53□□□□□ -0.24
CLCN6-203ENST00000376490 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
CLCN6-203ENST00000376490 CMC1Q7Z7K0 106 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 ADAMTSL2Q86TH1 951 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 CTAGE6Q86UF2 777 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 CTAGE4Q8IX94 777 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 OR11G2Q8NGC1 345 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 ZCCHC10Q8TBK6 192 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 IFT81Q8WYA0 676 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 RHBDF1Q96CC6 855 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 SMAD5Q99717 465 aaKnown RBP13.53□□□□□ -0.24
CLCN6-203ENST00000376490 SARGQ9BW04 601 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 MKKSQ9NPJ1 570 aaPredicted RBP13.53□□□□□ -0.24
CLCN6-203ENST00000376490 G3BP2Q9UN86 482 aaKnown RBP13.53□□□□□ -0.24
CLCN6-203ENST00000376490 DYRK1BQ9Y463 629 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 MAP4K5Q9Y4K4 846 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 PCDHGB7Q9Y5F8 929 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 TENM4Q6N022 2769 aa13.53□□□□□ -0.24
CLCN6-203ENST00000376490 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.24
CLCN6-203ENST00000376490 TRBC2A0A5B9 178 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 IDSB3KWA1 339 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 SGK494L7N484 410 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 KIF2AO00139 706 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-203ENST00000376490 TAPBPO15533 448 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 WDR47O94967 919 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 WISP1O95388 367 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 SERPIND1P05546 499 aa13.52□□□□□ -0.25
CLCN6-203ENST00000376490 MLLT10P55197 1068 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms