RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PSRC1Q6PGN9 363 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NXPE1Q8N323 547 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 C3orf58Q8NDZ4 430 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 OR2T11Q8NH01 316 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TFAP2CQ92754 450 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 C11orf24Q96F05 449 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SLC30A2Q9BRI3 323 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 RNF208Q9H0X6 261 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 WDR6Q9NNW5 1121 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TREX1Q9NSU2 369 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ACSL6Q9UKU0 697 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PCDHB14Q9Y5E9 798 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 A0A096LPI6 279 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TCRBV3S1A0A5B6 114 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 FAM172BPA6NC97 362 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM88BA6NKF7 163 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 FPR1P21462 350 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SLC5A2P31639 672 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SLC11A1P49279 550 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SP3Q02447 781 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CES4AQ5XG92 561 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GET4Q7L5D6 327 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 RNF175Q8N4F7 328 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NUDT8Q8WV74 236 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CRELD1Q96HD1 420 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 C1orf74Q96LT6 269 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GLOD5A6NK44 160 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CHST10O43529 356 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GUCY1B2O75343 617 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ERN1O75460 977 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 EOMESO95936 686 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 MLLT1Q03111 559 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GRM2Q14416 872 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 RUNDC3AQ59EK9 446 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CLECL1Q8IZS7 167 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ZFP90Q8TF47 636 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PDCD10Q9BUL8 212 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM106CQ9BVX2 250 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ADAMTS5Q9UNA0 930 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 UBFD1O14562 309 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NDUFB5O43674 189 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 LDB2O43679 373 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NOS1APO75052 506 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CSF2P04141 144 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 RLN1P04808 185 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 S100A1P23297 94 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GABARAPL2P60520 117 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 HSF2Q03933 536 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SLC13A2Q13183 592 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 E2F2Q14209 437 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SPIN4Q56A73 249 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 B3GNT8Q7Z7M8 397 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM80Q96HE8 168 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF597Q96LX8 424 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ALPK1Q96QP1 1244 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 C1QTNF1Q9BXJ1 281 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TPT1P8Q9HAU6 139 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 MOV10Q9HCE1 1003 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 IRGMA1A4Y4 181 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NPPAP01160 153 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 HSD17B1P14061 328 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TLX1P31314 330 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PCDH1Q08174 1060 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 BTBD16Q32M84 506 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GTF2IRD2BQ6EKJ0 949 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 BHLHB9Q6PI77 547 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GTF2IRD2Q86UP8 949 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TMCO6Q96DC7 493 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CXorf40BQ96DE9 158 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CCM2Q9BSQ5 444 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TIGARQ9NQ88 270 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 FAIMQ9NVQ4 179 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ARMC1Q9NVT9 282 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 DUS2Q9NX74 493 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 A0A075B6Q4 140 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 FUOMA2VDF0 154 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PSMD9O00233 223 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 HOXB6P17509 224 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 C4BPBP20851 252 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ETV3P41162 512 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 HLCSP50747 726 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 FAM189BP81408 668 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 GHRHRQ02643 423 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ST3GAL4Q11206 333 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 WSCD2Q2TBF2 565 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PM20D1Q6GTS8 502 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PLET1Q6UQ28 207 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 KDELC1Q6UW63 502 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CEACAM20Q6UY09 585 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CYS1Q717R9 158 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TSPAN33Q86UF1 283 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 JAZF1Q86VZ6 243 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NPAS3Q8IXF0 933 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 POP5Q969H6 163 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 IL12RB2Q99665 862 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 HEPHQ9BQS7 1158 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 OR51V1Q9H2C8 321 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TAC3Q9UHF0 121 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms