RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 Q9Y3F1 56 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 HLA-DPB1P04440 258 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF24P17028 368 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 FDXRP22570 491 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ACSL1P33121 698 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 MAGEA11P43364 429 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 DGKGP49619 791 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TAS2R50P59544 299 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 GPRC6AQ5T6X5 926 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 THOC7Q6I9Y2 204 aaKnown RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 GALNT12Q8IXK2 581 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 SEZ6LQ9BYH1 1024 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TIGARQ9NQ88 270 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 MTMR11A4FU01 709 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 DUXAA6NLW8 204 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 CCRL2O00421 344 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 CSNK2A2P19784 350 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 MPIP34949 423 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 IST1P53990 364 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF155Q12901 538 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 OR4D1Q15615 310 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 ANKRD26P1Q6NSI1 321 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 SHQ1Q6PI26 577 aaKnown RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 BRAT1Q6PJG6 821 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 Q6ZVU0 165 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 JAZF1Q86VZ6 243 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 LCN9Q8WX39 176 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 POLE3Q9NRF9 147 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 SDR39U1Q9NRG7 319 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 DNAJC27Q9NZQ0 273 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 CKLFQ9UBR5 152 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 COLEC10Q9Y6Z7 277 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 A0A1W2PRU2 124 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 MID1O15344 667 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 MATN4O95460 622 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 IFNA6P05013 189 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 HOXA11P31270 313 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 OR1E2P47887 323 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 NFATC2Q13469 925 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 ANKDD1AQ495B1 522 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 RBM23Q86U06 439 aaKnown RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 CCDC36Q8IYA8 594 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 TCEANCQ8N8B7 351 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 FAM46DQ8NEK8 389 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 PJA1Q8NG27 643 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF675Q8TD23 568 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 SH3RF2Q8TEC5 729 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 IGSF8Q969P0 613 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF354BQ96LW1 612 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 C12orf66Q96MD2 445 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 FRMD6Q96NE9 622 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 POLE4Q9NR33 117 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 SLC1A7O00341 560 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 CPNE3O75131 537 aaKnown RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 SLITRK5O94991 958 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 RPS13P62277 151 aaKnown RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 KCNC4Q03721 635 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 UPP1Q16831 310 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-203ENST00000375274 TMIGD1Q6UXZ0 262 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 FAM124AQ86V42 546 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 LINC00471Q8N535 108 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 NLGN2Q8NFZ4 835 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 LRRC20Q8TCA0 184 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 TMEM174Q8WUU8 243 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 L3HYPDHQ96EM0 354 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 DSN1Q9H410 356 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 MYO9BQ13459 2157 aa11.19□□□□□ -0.62
PTCH1-203ENST00000375274 PRMT3O60678 531 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 VIPP01282 170 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ATF6P18850 670 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CDKL1Q00532 357 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 RING1Q06587 406 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ABRAXAS2Q15018 415 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF789Q5FWF6 425 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CMTM8Q8IZV2 173 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CHCHD4Q8N4Q1 142 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 COX18Q8N8Q8 333 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ZCCHC10Q8TBK6 192 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ARMC5Q96C12 935 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ASPNQ9BXN1 380 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 TNFRSF10DQ9UBN6 386 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 C5P01031 1676 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ISPDA4D126 451 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 XKRYO14609 159 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 C6orf47O95873 294 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 JUNP05412 331 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 GSTM2P28161 218 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 CCR8P51685 355 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ALG11Q2TAA5 492 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 SLC25A24Q6NUK1 477 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
PTCH1-203ENST00000375274 PNPLA1Q8N8W4 532 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 POF1BQ8WVV4 589 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 NEK6Q9HC98 313 aa11.18□□□□□ -0.62
PTCH1-203ENST00000375274 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms