RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SLC5A11Q8WWX8 675 aa10.29□□□□□ -0.76
PGK1-201ENST00000373316 CNDP2Q96KP4 475 aaKnown RBP10.29□□□□□ -0.76
PGK1-201ENST00000373316 EPYCQ99645 322 aa10.29□□□□□ -0.76
PGK1-201ENST00000373316 ACTL8Q9H568 366 aa10.29□□□□□ -0.76
PGK1-201ENST00000373316 DZANK1Q9NVP4 752 aa10.29□□□□□ -0.76
PGK1-201ENST00000373316 PCDHB11Q9Y5F2 797 aa10.29□□□□□ -0.76
PGK1-201ENST00000373316 TTC3P53804 2025 aa10.29□□□□□ -0.76
PGK1-201ENST00000373316 PIGBOS1A0A0B4J2F0 54 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 JUPP14923 745 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CHRNA4P43681 627 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CCL23P55773 120 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 MTPNP58546 118 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CBLBQ13191 982 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CCNIQ14094 377 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 MPP2Q14168 576 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 TMEM35AQ53FP2 167 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 UNC50Q53HI1 259 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 REEP3Q6NUK4 255 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 FAM171BQ6P995 826 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 KLHL24Q6TFL4 600 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 OR9A1PQ8NGU1 263 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 XAGE5Q8WWM1 108 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 SMG7Q92540 1137 aaKnown RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 SP140LQ9H930 580 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 MRPS17Q9Y2R5 130 aaKnown RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 PCDHGB5Q9Y5G0 923 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 PCDHGB2Q9Y5G2 931 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 GPC6Q9Y625 555 aaPredicted RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 PSMD11O00231 422 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 DLGAP1O14490 977 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 PRKD3O94806 890 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 NUDT14O95848 222 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 DRD2P14416 443 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ACRV1P26436 265 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CBX3Q13185 183 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 LSAMPQ13449 338 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 DSC3Q14574 896 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ZNF460Q14592 562 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 XKR4Q5GH76 650 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 DNM1P34Q6PK57 102 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 LINC00299Q6ZSB3 139 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 GALNT5Q7Z7M9 940 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 KBTBD2Q8IY47 623 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 PSD4Q8NDX1 1056 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CPNE2Q96FN4 548 aaPredicted RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 MYRFLQ96LU7 910 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ERMAPQ96PL5 475 aaPredicted RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 BRF2Q9HAW0 419 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CAPN10Q9HC96 672 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 FABP12A6NFH5 140 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 NT5C1B-RDH14C9J2C7 533 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 BTN3A3O00478 584 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 BEST1O76090 585 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CD2P06729 351 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 C8AP07357 584 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 YES1P07947 543 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ZNF3P17036 446 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 GRK6P43250 576 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ARCN1P48444 511 aaKnown RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 ERVK-21P61565 698 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ACTC1P68032 377 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ACTA1P68133 377 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CDKL1Q00532 357 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 ZNF155Q12901 538 aaPredicted RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 EIF4HQ15056 248 aaKnown RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
PGK1-201ENST00000373316 C14orf80Q86SX3 495 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 PLCZ1Q86YW0 608 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CMTR2Q8IYT2 770 aaKnown RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 MFSD2AQ8NA29 543 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 SCAMP5Q8TAC9 235 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 DCSTAMPQ9H295 470 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 TRIM36Q9NQ86 728 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 STUB1Q9UNE7 303 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CASP8AP2Q9UKL3 1982 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 A6NHS1 94 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 NIPSNAP2O75323 286 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 INMTO95050 263 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 RENP00797 406 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 GGT1P19440 569 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 RPA4Q13156 261 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 KEAP1Q14145 624 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 MBTPS1Q14703 1052 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CHRNA6Q15825 494 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 CAMKK1Q8N5S9 505 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 TRIM2Q9C040 744 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 TPT1P8Q9HAU6 139 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 TRNAU1APQ9NX07 287 aaKnown RBP10.28□□□□□ -0.76
PGK1-201ENST00000373316 SOHLH2Q9NX45 425 aa10.28□□□□□ -0.76
PGK1-201ENST00000373316 FAM149AA5PLN7 773 aa10.27□□□□□ -0.76
PGK1-201ENST00000373316 CAPN14A8MX76 684 aa10.27□□□□□ -0.76
PGK1-201ENST00000373316 OR1F1O43749 312 aa10.27□□□□□ -0.76
PGK1-201ENST00000373316 GATBO75879 557 aaKnown RBP10.27□□□□□ -0.76
PGK1-201ENST00000373316 RAB36O95755 333 aa10.27□□□□□ -0.76
PGK1-201ENST00000373316 HLA-DQA2P01906 255 aa10.27□□□□□ -0.76
PGK1-201ENST00000373316 CCT3P49368 545 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms