RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ASMTP46597 345 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 E2F2Q14209 437 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 MEP1AQ16819 746 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 CTU2Q2VPK5 515 aaKnown RBP18.05■□□□□ 0.48
USP49-202ENST00000373010 SPIN4Q56A73 249 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 MMAAQ8IVH4 418 aaKnown RBP18.05■□□□□ 0.48
USP49-202ENST00000373010 FBXO15Q8NCQ5 510 aaPredicted RBP18.05■□□□□ 0.48
USP49-202ENST00000373010 OR9A1PQ8NGU1 263 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 C12orf43Q96C57 262 aaKnown RBP18.05■□□□□ 0.48
USP49-202ENST00000373010 OCEL1Q9H607 264 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 TRIM39Q9HCM9 518 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 EXD2Q9NVH0 621 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 SH3BP4Q9P0V3 963 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 EXO1Q9UQ84 846 aaKnown RBP18.05■□□□□ 0.48
USP49-202ENST00000373010 TMEM98Q9Y2Y6 226 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 RWDD3Q9Y3V2 267 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 DYRK1BQ9Y463 629 aa18.05■□□□□ 0.48
USP49-202ENST00000373010 GRXCR1A8MXD5 290 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 NFATC1O95644 943 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 GAB1Q13480 694 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 ELAVL3Q14576 367 aaKnown RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 ZNF385BQ569K4 471 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 GPR107Q5VW38 600 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 ZNF773Q6PK81 442 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 FAM83HQ6ZRV2 1179 aaPredicted RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 CEP68Q76N32 757 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 DCP2Q8IU60 420 aaKnown RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 NPAS3Q8IXF0 933 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 ARL10Q8N8L6 244 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 METTL2AQ96IZ6 378 aaKnown RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 PHF12Q96QT6 1004 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 C2orf16Q68DN1 1984 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 TAP2Q03519 686 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 EPS8Q12929 822 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 IER5LQ5T953 404 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 ZNF765Q7L2R6 523 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 R3HCC1LQ7Z5L2 792 aaKnown RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 HIPK1Q86Z02 1210 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 C2orf73Q8N5S3 287 aaPredicted RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 PLA2G15Q8NCC3 412 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 CHDHQ8NE62 594 aaPredicted RBP18.04■□□□□ 0.48
USP49-202ENST00000373010 PHOSPHO2Q8TCD6 241 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 STARD8Q92502 1023 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 SNX19Q92543 992 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 SGPP1Q9BX95 441 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 IL1RAPQ9NPH3 570 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 FZD4Q9ULV1 537 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 ALPK3Q96L96 1907 aa18.04■□□□□ 0.48
USP49-202ENST00000373010 MYO1GB0I1T2 1018 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 TGFB1P01137 390 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 NTRK1P04629 796 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 ABCB1P08183 1280 aaPredicted RBP18.03■□□□□ 0.48
USP49-202ENST00000373010 C1GALT1C1LP0DN25 315 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 CRHBPP24387 322 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 HPCAL1P37235 193 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 VLDLRP98155 873 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 CD47Q08722 323 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 PDE12Q6L8Q7 609 aaKnown RBP18.03■□□□□ 0.48
USP49-202ENST00000373010 ERICH5Q6P6B1 374 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 ARMCX6Q7L4S7 300 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 GALNT5Q7Z7M9 940 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 LRRC56Q8IYG6 542 aaPredicted RBP18.03■□□□□ 0.48
USP49-202ENST00000373010 SYNPOQ8N3V7 929 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 HSH2DQ96JZ2 352 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 ASB16Q96NS5 453 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 IL17FQ96PD4 163 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 NAA50Q9GZZ1 169 aaKnown RBP18.03■□□□□ 0.48
USP49-202ENST00000373010 OR51B5Q9H339 312 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 BTNL2Q9UIR0 455 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 PLAGL1Q9UM63 463 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 VPS4AQ9UN37 437 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 LOC100130705A0A1B0GUX0 176 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 C1orf226A1L170 272 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 PIPSLA2A3N6 862 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 TMX2-CTNND1H3BSU7 103 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 OR2T5Q6IEZ7 315 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 SHQ1Q6PI26 577 aaKnown RBP18.03■□□□□ 0.48
USP49-202ENST00000373010 TMEM26Q6ZUK4 368 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 PGBD3Q8N328 593 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 ZNF740Q8NDX6 193 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 OR2T29Q8NH02 315 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 WDR48Q8TAF3 677 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 POP5Q969H6 163 aaKnown RBP18.03■□□□□ 0.48
USP49-202ENST00000373010 MAL2Q969L2 176 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 COQ8BQ96D53 544 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 NRTNQ99748 197 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 TMEM245Q9H330 911 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 FANCEQ9HB96 536 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 DYRK4Q9NR20 520 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 C3orf18Q9UK00 162 aa18.03■□□□□ 0.48
USP49-202ENST00000373010 SEMG1P04279 462 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 AGXTP21549 392 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 CASP9P55211 416 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 C6orf141Q5SZD1 244 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 ERN2Q76MJ5 926 aaKnown RBP18.02■□□□□ 0.48
USP49-202ENST00000373010 COMMD6Q7Z4G1 85 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 CYP4Z1Q86W10 505 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 OR4K1Q8NGD4 311 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 OR4A15Q8NGL6 344 aa18.02■□□□□ 0.48
USP49-202ENST00000373010 REPS1Q96D71 796 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms