RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CERS6Q6ZMG9 384 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 TIFAQ96CG3 184 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 LAMP5Q9UJQ1 280 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 CASC3O15234 703 aaKnown RBP14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RCBTB2O95199 551 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ABRAXAS2Q15018 415 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 SHC3Q92529 594 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 GTF2H4Q92759 462 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 GPR21Q99679 349 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 SLC35A5Q9BS91 424 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 DUSP26Q9BV47 211 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 RBCK1Q9BYM8 510 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 ATG5Q9H1Y0 275 aa14.87□□□□□ -0.03
COL5A1-201ENST00000371817 IMPDH1P20839 514 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 HTR1BP28222 390 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 OR4K2Q8NGD2 314 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 OR51D1Q8NGF3 324 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 CHPT1Q8WUD6 406 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 ZIM2Q9NZV7 527 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 KRBA1A5PL33 1030 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 TAS2R50P59544 299 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 NTRK2Q16620 822 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 C3P1Q6ZMU1 363 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 NKD2Q969F2 451 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-201ENST00000371817 PKP4Q99569 1192 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 ELP3Q9H9T3 547 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 CHRAC1Q9NRG0 131 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 IQGAP3Q86VI3 1631 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 PRKYO43930 277 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 MFSD13AQ14CX5 517 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF696Q9H7X3 374 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 MKS1Q9NXB0 559 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 UPK1BO75841 260 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 MYLK3Q32MK0 819 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 MYLIPQ8WY64 445 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 TFB2MQ9H5Q4 396 aaKnown RBP14.86□□□□□ -0.03
COL5A1-201ENST00000371817 SLC26A5P58743 744 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 CHRFAM7AQ494W8 412 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 TMEM41AQ96HV5 264 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 XPNPEP1Q9NQW7 623 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 FAM86C1Q9NVL1 165 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 K7EPK0 472 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 CHATP28329 748 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 TNFAIP8L2Q6P589 184 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-201ENST00000371817 PXKQ7Z7A4 578 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 C12orf40Q86WS4 652 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 FAM71E2Q8N5Q1 922 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 BORCS7Q96B45 105 aa14.86□□□□□ -0.03
COL5A1-201ENST00000371817 TMEM121BQ9BXQ6 578 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-201ENST00000371817 FAM230AA0A1W2PPH8 454 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 CDKN2BP42772 138 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 TBC1D25Q3MII6 688 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 CACUL1Q86Y37 369 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 SLC15A4Q8N697 577 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 SC5DO75845 299 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 SLC2A5P22732 501 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 GPX6P59796 221 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 LNX2Q8N448 690 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 OR4Q3Q8NH05 313 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 SNAPC3Q92966 411 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 GPATCH2Q9NW75 528 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 COPS7AQ9UBW8 275 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF223Q9UK11 482 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-201ENST00000371817 WASF3Q9UPY6 502 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF175Q9Y473 711 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 BMP8BP34820 402 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 DGKQP52824 942 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 IKBKEQ14164 716 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 BMP8AQ7Z5Y6 402 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 DNAJC27Q9NZQ0 273 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 CPS1P31327 1500 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 FAM237AA0A1B0GTK4 181 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 CLDN4O14493 209 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ARSFP54793 590 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 CACNG1Q06432 222 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 POM121L1PQ3SYA9 428 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 LRRC55Q6ZSA7 311 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 GPR149Q86SP6 731 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 MCEMP1Q8IX19 187 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 SAMD11Q96NU1 681 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 FZD4Q9ULV1 537 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ATG4BQ9Y4P1 393 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 KIAA0513O60268 411 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 TAAR8Q969N4 342 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 OR4F21O95013 312 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 GNRH1P01148 92 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 AMHP03971 560 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 PRPS1L1P21108 318 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 DCLRE1AQ6PJP8 1040 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ZNF527Q8NB42 609 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 OR2T35Q8NGX2 323 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 OR10G6Q8NH81 332 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 RBM18Q96H35 190 aaKnown RBP14.85□□□□□ -0.03
COL5A1-201ENST00000371817 ASTN1O14525 1302 aa14.85□□□□□ -0.03
COL5A1-201ENST00000371817 GABARAPL2P60520 117 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms