RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PELI2Q9HAT8 420 aa15.24■□□□□ 0.03
PFDN4-201ENST00000371419 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
PFDN4-201ENST00000371419 ARL2BPQ9Y2Y0 163 aa15.24■□□□□ 0.03
PFDN4-201ENST00000371419 RRP15Q9Y3B9 282 aaKnown RBP15.24■□□□□ 0.03
PFDN4-201ENST00000371419 TMEM184BQ9Y519 407 aaPredicted RBP15.24■□□□□ 0.03
PFDN4-201ENST00000371419 AP1M2Q9Y6Q5 423 aa15.24■□□□□ 0.03
PFDN4-201ENST00000371419 KCNE1BA0A087WTH5 132 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 LOC105369274A0A096LPK9 316 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 LOC102723532A0A0G2JNH3 316 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 STX16-NPEPL1H3BU86 382 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 STX16O14662 325 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 CLGNO14967 610 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 ZSCAN9O15535 394 aaPredicted RBP15.23■□□□□ 0.03
PFDN4-201ENST00000371419 EDF1O60869 148 aaKnown RBP15.23■□□□□ 0.03
PFDN4-201ENST00000371419 CTSBP07858 339 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 NEFHP12036 1026 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 SERPINB4P48594 390 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 RPS15AP62244 130 aaKnown RBP15.23■□□□□ 0.03
PFDN4-201ENST00000371419 IFT88Q13099 833 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 SLCO4C1Q6ZQN7 724 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 CCDC121Q6ZUS5 278 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 OR4N4Q8N0Y3 316 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 TBC1D19Q8N5T2 526 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 ZNF248Q8NDW4 579 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 RAB3IL1Q8TBN0 382 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 RERGQ96A58 199 aaPredicted RBP15.23■□□□□ 0.03
PFDN4-201ENST00000371419 THAP11Q96EK4 314 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 OR2A5Q96R48 311 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 MANSC1Q9H8J5 431 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 ENAMQ9NRM1 1142 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 EMCNQ9ULC0 261 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 ANGPTL3Q9Y5C1 460 aa15.23■□□□□ 0.03
PFDN4-201ENST00000371419 FEZF1A0PJY2 475 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 A8MT66 165 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 H0YGG7 62 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 KLF11O14901 512 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 BIRC5O15392 142 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 ZNF749O43361 778 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 CPNE3O75131 537 aaKnown RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 SIX3O95343 332 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 DLGAP3O95886 979 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 NTRK1P04629 796 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 EIF2S1P05198 315 aaKnown RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 C1GALT1C1LP0DN25 315 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 LIPCP11150 499 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 EPB42P16452 691 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 EEF1DP29692 281 aaKnown RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 WASHC2DQ5SRD0 308 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 PRAMEF17Q5VTA0 474 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 ATG9BQ674R7 924 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 DTX1Q86Y01 620 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 TEX9Q8N6V9 391 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 ZNF655Q8N720 491 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 KDF1Q8NAX2 398 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 RNF31Q96EP0 1072 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 AIF1LQ9BQI0 150 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 SARGQ9BW04 601 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 SLC7A5P2Q9GIP4 190 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 EHD1Q9H4M9 534 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 ACTR5Q9H9F9 607 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 SDK2Q58EX2 2172 aa15.22■□□□□ 0.03
PFDN4-201ENST00000371419 ANKRD11Q6UB99 2663 aaPredicted RBP15.22■□□□□ 0.03
PFDN4-201ENST00000371419 TRBC2A0A5B9 178 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 FITM1A5D6W6 292 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 LRRC14BA6NHZ5 514 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 CCT8L1PA6NM43 557 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 PLIN3O60664 434 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 H2AFYO75367 372 aaKnown RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 PROCP04070 461 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 HBQ1P09105 142 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 EPORP19235 508 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 ATP5F1P24539 256 aaPredicted RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 CXCR2P25025 360 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 VARSP26640 1264 aaKnown RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 PIK3CGP48736 1102 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 NFKB2Q00653 900 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 REEP5Q00765 189 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 MEF2AQ02078 507 aaPredicted RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 MAP7Q14244 749 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 GRM7Q14831 915 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 XKR6Q5GH73 641 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 C6orf15Q6UXA7 325 aaPredicted RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 FAM47EQ6ZV65 393 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 TIPARPQ7Z3E1 657 aaKnown RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 PROSER1Q86XN7 944 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 CSNK1A1LQ8N752 337 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 TTC29Q8NA56 475 aaPredicted RBP15.21■□□□□ 0.03
PFDN4-201ENST00000371419 GALNT6Q8NCL4 622 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 KCNE4Q8WWG9 221 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 CLIP3Q96DZ5 547 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 NDC1Q9BTX1 674 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 SYNPO2LQ9H987 977 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 STARD5Q9NSY2 213 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 KLHL14Q9P2G3 628 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 SRPK3Q9UPE1 567 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 PCDHGA4Q9Y5G9 962 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 DMXL2Q8TDJ6 3036 aa15.21■□□□□ 0.03
PFDN4-201ENST00000371419 MDC1Q14676 2089 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms