RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 GRK6P43250 576 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FLT3LGP49771 235 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 GABARAPL2P60520 117 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 SCRN3Q0VDG4 424 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 HNRNPA0Q13151 305 aaKnown RBP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FAM72AQ5TYM5 149 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FAM72DQ6L9T8 149 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 XKRXQ6PP77 449 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 ZNF367Q7RTV3 350 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 THOC6Q86W42 341 aaKnown RBP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FAM72BQ86X60 149 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 EFHD2Q96C19 240 aaPredicted RBP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 ANKRD60Q9BZ19 345 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 NLE1Q9NVX2 485 aaPredicted RBP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 AKAP12Q02952 1782 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 KCPQ6ZWJ8 1503 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 TEX28O15482 410 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 MTX2O75431 263 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FGF19O95750 216 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 PSMD8P48556 350 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 MS4A2Q01362 244 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 BTBD16Q32M84 506 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 SYVN1Q86TM6 617 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 PHC2Q8IXK0 858 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 SPAG16Q8N0X2 631 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 SLC15A4Q8N697 577 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FBXO22Q8NEZ5 403 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 TMIGD2Q96BF3 282 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 HTATIP2Q9BUP3 242 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 SEZ6LQ9BYH1 1024 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 IGFLR1Q9H665 355 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 BRD7Q9NPI1 651 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 HCN2Q9UL51 889 aa16.64■□□□□ 0.25
PTP4A1-201ENST00000370651 FAM170BA6NMN3 283 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 INMT-MINDY4F8WBC2 141 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 TRIM3O75382 744 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ITGA10O75578 1167 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 RB1P06400 928 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 MPIP34949 423 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 RPP38P78345 283 aaKnown RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ZNF252P-AS1Q0IIN9 211 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 SHQ1Q6PI26 577 aaKnown RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 QSOX2Q6ZRP7 698 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 FAM129CQ86XR2 697 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CCDC28AQ8IWP9 274 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ZCCHC10Q8TBK6 192 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 FATE1Q969F0 183 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ZNF514Q96K75 400 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 MCCC1Q96RQ3 725 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 TMEM246Q9BRR3 403 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 LGR4Q9BXB1 951 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CCSER2Q9H7U1 834 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 GKN1Q9NS71 199 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ABCB8Q9NUT2 735 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 C14orf119Q9NWQ9 140 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 RBM7Q9Y580 266 aaKnown RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 A0A0G2JPF8 293 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 HNRNPCL3B7ZW38 293 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ARL6IP5O75915 188 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 HNRNPCL4P0DMR1 293 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CSNK2A2P19784 350 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 DDX6P26196 483 aaKnown RBP eCLIP16.63■□□□□ 0.251e-16■■■■■ 28.3
PTP4A1-201ENST00000370651 MAPK15Q8TD08 544 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 SUSD3Q96L08 255 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 PTGDR2Q9Y5Y4 395 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 LMO7Q8WWI1 1683 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 FUOMA2VDF0 154 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 SEPT4O43236 478 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 MATN4O95460 622 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CBX5P45973 191 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 MS4A13Q5J8X5 152 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 DNAJA4Q8WW22 397 aaPredicted RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ZDHHC7Q9NXF8 308 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 TRBV23OR9-2A0A075B6M9 112 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 A0A096LPI6 279 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CNTN5O94779 1100 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 SORBS2O94875 1100 aaKnown RBP16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CLDN7O95471 211 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 GNALP38405 381 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CLCA4Q14CN2 919 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 GPALPP1Q8IXQ4 340 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CCDC107Q8WV48 283 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 OR2B2Q9GZK3 357 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 CST11Q9H112 138 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ADAP2Q9NPF8 381 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 ENAMQ9NRM1 1142 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 TMEM248Q9NWD8 314 aa16.63■□□□□ 0.25
PTP4A1-201ENST00000370651 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
PTP4A1-201ENST00000370651 L7N2F9 121 aa16.62■□□□□ 0.25
PTP4A1-201ENST00000370651 LAG3P18627 525 aa16.62■□□□□ 0.25
PTP4A1-201ENST00000370651 HK1P19367 917 aa16.62■□□□□ 0.25
PTP4A1-201ENST00000370651 GALNTL5Q7Z4T8 443 aa16.62■□□□□ 0.25
PTP4A1-201ENST00000370651 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms