RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 C17orf62Q9BQA9 187 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 EFHD1Q9BUP0 239 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 IQCGQ9H095 443 aaKnown RBP14.16□□□□□ -0.14
COL9A1-204ENST00000370496 CHST8Q9H2A9 424 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 SPNS1Q9H2V7 528 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 SYNPO2LQ9H987 977 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 TMEM216Q9P0N5 145 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 FER1L5A0AVI2 2057 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 KCNE1BA0A087WTH5 132 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 C21orf140B9A014 251 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 STX16-NPEPL1H3BU86 382 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 STX16O14662 325 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 H2AFYO75367 372 aaKnown RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 SIX3O95343 332 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 C1GALT1C1LP0DN25 315 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 TCN2P20062 427 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 ARL1P40616 181 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 PIK3CGP48736 1102 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 CXADRP78310 365 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 CYP4F2P78329 520 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 DCDP81605 110 aaKnown RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 IRF8Q02556 426 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 ZNF844Q08AG5 666 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 DNASE1L3Q13609 305 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 SLC9A5Q14940 896 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 RBBP5Q15291 538 aaKnown RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 PRTGQ2VWP7 1150 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 C16orf46Q6P387 395 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 FAM199XQ6PEV8 388 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 SLCO4C1Q6ZQN7 724 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 VN1R4Q7Z5H5 301 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 MYLK4Q86YV6 388 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 SRRM1Q8IYB3 904 aaKnown RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 KRT78Q8N1N4 520 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 TEX9Q8N6V9 391 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 ZSCAN1Q8NBB4 408 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 CAMKVQ8NCB2 501 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 ZCCHC10Q8TBK6 192 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 PTCD3Q96EY7 689 aaKnown RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 C10orf90Q96M02 699 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 GBP5Q96PP8 586 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 EFCAB11Q9BUY7 163 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 EHD1Q9H4M9 534 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 CPNE5Q9HCH3 593 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 ENAMQ9NRM1 1142 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 DCDC2Q9UHG0 476 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 GPN3Q9UHW5 284 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-204ENST00000370496 KCND3Q9UK17 655 aa14.15□□□□□ -0.14
COL9A1-204ENST00000370496 LRRC14BA6NHZ5 514 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 A8MT66 165 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 KATNA1O75449 491 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 GCGRP47871 477 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 SCTRP47872 440 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 CCT5P48643 541 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 RPS15P62841 145 aaKnown RBP14.14□□□□□ -0.15
COL9A1-204ENST00000370496 RGS1Q08116 209 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 CHIT1Q13231 466 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 GTF2H2Q13888 395 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 PCBP2Q15366 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL9A1-204ENST00000370496 NDUFA9Q16795 377 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 PAGE2BQ5JRK9 111 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 CEP85LQ5SZL2 805 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 ARHGAP40Q5TG30 622 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 GARNL3Q5VVW2 1013 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 GTF2H2CQ6P1K8 395 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 FAM198BQ6UWH4 519 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 TMIGD1Q6UXZ0 262 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 TRABD2AQ86V40 505 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL9A1-204ENST00000370496 CCDC63Q8NA47 563 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 SLC13A3Q8WWT9 602 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 STARD8Q92502 1023 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 APOPT1Q96IL0 206 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 TMEM109Q9BVC6 243 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 DRC3Q9H069 523 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 CENPHQ9H3R5 247 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 AKIRIN1Q9H9L7 192 aaPredicted RBP14.14□□□□□ -0.15
COL9A1-204ENST00000370496 GEMIN8Q9NWZ8 242 aaKnown RBP14.14□□□□□ -0.15
COL9A1-204ENST00000370496 IFT80Q9P2H3 777 aaPredicted RBP14.14□□□□□ -0.15
COL9A1-204ENST00000370496 LAMA5O15230 3695 aa14.14□□□□□ -0.15
COL9A1-204ENST00000370496 RGS16O15492 202 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 LCMT2O60294 686 aaKnown RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 EPORP19235 508 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 CRHR1P34998 444 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 AHRP35869 848 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 EMP3P54852 163 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 NFKB2Q00653 900 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 LAPTM5Q13571 262 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 DOC2AQ14183 400 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 NCF4Q15080 339 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 HIST2H2ACQ16777 129 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 NKAIN1Q4KMZ8 207 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF385CQ66K41 422 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 HIST2H2AA3Q6FI13 130 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 METTL2BQ6P1Q9 378 aaKnown RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 C19orf48Q6RUI8 117 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF517Q6ZMY9 492 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 GOLGA7Q7Z5G4 137 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ENDOVQ8N8Q3 282 aaKnown RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 TTLQ8NG68 377 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms