RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 SOX1O00570 391 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 MID1O15344 667 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 MPZL2O60487 215 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 DHFRP00374 187 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 CSTBP04080 98 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 CREB1P16220 341 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ZNF19P17023 458 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 IMPDH1P20839 514 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 MAN2A2P49641 1150 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 GBX2P52951 348 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 RPS21P63220 83 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LMAN2Q12907 356 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PDSS1Q5T2R2 415 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ADNP2Q6IQ32 1131 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 BEND4Q6ZU67 534 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 JAGN1Q8N5M9 183 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 OR10G2Q8NGC3 310 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SPHK2Q9NRA0 654 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 B4GALT6Q9UBX8 382 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 MGAT4AQ9UM21 535 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LATO43561 262 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SOX14O95416 240 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 VEGFBP49765 207 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 UPP1Q16831 310 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SMPDL3AQ92484 453 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 CCDC120Q96HB5 630 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PRR11Q96HE9 360 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 CCDC115Q96NT0 180 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ZNF347Q96SE7 839 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ASPNQ9BXN1 380 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ZNF717Q9BY31 904 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 GPR62Q9BZJ7 368 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 FLRT1Q9NZU1 646 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 GRHPRQ9UBQ7 328 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 MAN2B2Q9Y2E5 1009 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 OAZ2O95190 189 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 GPR17Q13304 367 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 Q6ZVL8 140 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LRRC70Q7Z2Q7 622 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ZDHHC12Q96GR4 267 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 C2orf92A0A1B0GVN3 265 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 J3QRK9 145 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SYNGR4O95473 234 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 IQCF3P0C7M6 154 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 FBLP22087 321 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PEX2P28328 305 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 OGDHQ02218 1023 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PTP4A2Q12974 167 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ECH1Q13011 328 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 OR9A1PQ8NGU1 263 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 KCTD13Q8WZ19 329 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SCAMP4Q969E2 229 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ROPN1LQ96C74 230 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PAAF1Q9BRP4 392 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 IL23AQ9NPF7 189 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 RBMX2Q9Y388 322 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PGLSO95336 258 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 PXNP49023 591 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ENTPD1P49961 510 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 AGTR2P50052 363 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 UFM1P61960 85 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ERVK-8P63133 956 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LASP1Q14847 261 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SLC39A4Q6P5W5 647 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 SLC39A5Q6ZMH5 540 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ERN2Q76MJ5 926 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 AKAP14Q86UN6 197 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 CENPNQ96H22 339 aaPredicted RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 COQ10BQ9H8M1 238 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 LYARQ9NX58 379 aaKnown RBP8.3□□□□□ -1.08
ABCA4-201ENST00000370225 OR1A2Q9Y585 309 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
ABCA4-201ENST00000370225 ANKRD26Q9UPS8 1709 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 A6NL46 340 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 ZNF30P17039 623 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 HNF1BP35680 557 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 PTCHD3Q3KNS1 767 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 FAM69BQ5VUD6 431 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 TMIGD1Q6UXZ0 262 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 RNF130Q86XS8 419 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 NTAN1Q96AB6 310 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 TESCQ96BS2 214 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 OR1F2PQ96R84 312 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 ZDHHC2Q9UIJ5 367 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 PCDHGA6Q9Y5G7 932 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 SPIN1Q9Y657 262 aaPredicted RBP8.29□□□□□ -1.08
ABCA4-201ENST00000370225 SMIM30A4D0T7 59 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 A8MT66 165 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 H3BQ06 376 aaPredicted RBP8.29□□□□□ -1.08
ABCA4-201ENST00000370225 PRPS1L1P21108 318 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 PRKCDQ05655 676 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 RBM48Q5RL73 367 aaKnown RBP8.29□□□□□ -1.08
ABCA4-201ENST00000370225 SVOPLQ8N434 492 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 ABHD5Q8WTS1 349 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 NODALQ96S42 347 aa8.29□□□□□ -1.08
ABCA4-201ENST00000370225 FAM129BQ96TA1 746 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms