RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MZT1Q08AG7 82 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 PTGISQ16647 500 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 ALDH1L2Q3SY69 923 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 LCLAT1Q6UWP7 414 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 ZER1Q7Z7L7 766 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 MFN1Q8IWA4 741 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 GPC2Q8N158 579 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 GBP7Q8N8V2 638 aaPredicted RBP3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 OR5T2Q8NGG2 359 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 MRPS27Q92552 414 aaKnown RBP3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 NXPE2Q96DL1 559 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 SPATA33Q96N06 139 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 LRRC3BQ96PB8 259 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 BTBD9Q96Q07 612 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 KATNB1Q9BVA0 655 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 PHPT1Q9NRX4 125 aaPredicted RBP3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 POMT2Q9UKY4 750 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 SELENOKQ9Y6D0 94 aa3.66□□□□□ -1.82
RNU4-28P-201ENST00000364739 HEG1Q9ULI3 1381 aa3.65□□□□□ -1.82
RNU4-28P-201ENST00000364739 UBE2CO00762 179 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 TLX2O43763 284 aaPredicted RBP3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 KRT33AO76009 404 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 GGPS1O95749 300 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 LDHCP07864 332 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 SELEP16581 610 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 AOC1P19801 751 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 ETV5P41161 510 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 PGFP49763 221 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 DLK1P80370 383 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 CAMK2DQ13557 499 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 DUSP5Q16690 384 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 SUSD4Q5VX71 490 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 CPEB2Q7Z5Q1 589 aaKnown RBP3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 C5orf24Q7Z6I8 188 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZFAND4Q86XD8 727 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 C17orf47Q8NEP4 570 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 OR4C15Q8NGM1 316 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 EXT2Q93063 718 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 PGM2Q96G03 612 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 GAL3ST4Q96RP7 486 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 SDCBP2Q9H190 292 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 SNX25Q9H3E2 840 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 ACTL8Q9H568 366 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 TBC1D13Q9NVG8 400 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 POLLQ9UGP5 575 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 LNPEPQ9UIQ6 1025 aa3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 ELF5Q9UKW6 265 aaPredicted RBP3.65□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 SYNDIG1LA6NDD5 238 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 ACOD1A6NK06 481 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 SHISA7A6NL88 538 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 C17orf105B2RV13 164 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 SNAP91O60641 907 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 CYTIPO60759 359 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 HPRP00739 348 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 SFTPDP35247 375 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 HSD17B3P37058 310 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 CAPGP40121 348 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 LIMK2P53671 638 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 MTCP1P56278 107 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 OR1D5P58170 312 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 BTG1P62324 171 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 CALD1Q05682 793 aaKnown RBP3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZNF177Q13360 481 aaPredicted RBP3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 KYNUQ16719 465 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 CST9LP1Q5W188 147 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 ANKRD33Q7Z3H0 272 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC47A2Q86VL8 602 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 FAM131BQ86XD5 332 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 HPS6Q86YV9 775 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 ERC1Q8IUD2 1116 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 APCDD1Q8J025 514 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 POM121L12Q8N7R1 296 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 CAMKVQ8NCB2 501 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 PYCR2Q96C36 320 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 LGMNQ99538 433 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 GTPBP2Q9BX10 602 aaKnown RBP3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 PUS3Q9BZE2 481 aaKnown RBP3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 MTHFD2LQ9H903 347 aaPredicted RBP3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 CTSZQ9UBR2 303 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 NEDD4P46934 1319 aa3.64□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZNF646O15015 1829 aaPredicted RBP3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 SHISA9B4DS77 424 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 H3BMM5 538 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 K7EQD1 137 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 SURF4O15260 269 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 LRCH4O75427 683 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 SAP30O75446 220 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 FYNP06241 537 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 AADACP22760 399 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 HSPA4P34932 840 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZFP36L1Q07352 338 aaKnown RBP3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 RASA2Q15283 850 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 LBHQ53QV2 105 aaPredicted RBP3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 TIPARPQ7Z3E1 657 aaKnown RBP3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 MAML2Q8IZL2 1156 aaPredicted RBP3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 LINC00612Q8N6U2 182 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 CCDC63Q8NA47 563 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 OR52B6Q8NGF0 335 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 VPS33AQ96AX1 596 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms