RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 BMPR1BO00238 502 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 CACNB4O00305 520 aaPredicted RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 VEGFDO43915 354 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 EDN1P05305 212 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 GPIP06744 558 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 YES1P07947 543 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 P4HA1P13674 534 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 OR3A3P47888 321 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 UCP2P55851 309 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 DLX5P56178 289 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 YBEYP58557 167 aaPredicted RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 SLC34A1Q06495 639 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 STXBP2Q15833 593 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 EXT1Q16394 746 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 CCDC92Q53HC0 331 aaPredicted RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 PM20D1Q6GTS8 502 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 SLC35E4Q6ICL7 350 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 RABEPKQ7Z6M1 372 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 TRPT1Q86TN4 253 aaKnown RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 STPG4Q8N801 248 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 LRTM2Q8N967 370 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 OR7A2PQ8NGA2 310 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 LRRC8CQ8TDW0 803 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 ST7LQ8TDW4 575 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 METTL21AQ8WXB1 218 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 EEF2KMTQ96G04 330 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 LMLNQ96KR4 655 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 BTBD9Q96Q07 612 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 GAL3ST4Q96RP7 486 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 ZNF559Q9BR84 538 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 ALKBH7Q9BT30 221 aaPredicted RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 IDI2Q9BXS1 227 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 PITPNM3Q9BZ71 974 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 P2RY12Q9H244 342 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 THAP9Q9H5L6 903 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 RNF121Q9H920 327 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 MAGEF1Q9HAY2 307 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 SIX2Q9NPC8 291 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 INTS9Q9NV88 658 aaKnown RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 HMG20BQ9P0W2 317 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 C19orf25Q9UFG5 118 aaPredicted RBP3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 IL36AQ9UHA7 158 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 KIAA1210Q9ULL0 1709 aa3.36□□□□□ -1.87
RNU6-28P-201ENST00000362378 C5orf51A6NDU8 294 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ANTXRLA6NF34 631 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 KLF11O14901 512 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ACSL4O60488 711 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 CIDEAO60543 219 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 NADKO95544 446 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 CAVIN2O95810 425 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 PAK4O96013 591 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 NGFP01138 241 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ATP1B1P05026 303 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ELAVL4P26378 380 aaKnown RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 NT5C2P49902 561 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 CLDN17P56750 224 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 STARD6P59095 220 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 RPP38P78345 283 aaKnown RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 MYL7Q01449 175 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 RBM39Q14498 530 aaKnown RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 RBBP5Q15291 538 aaKnown RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 KIAA1644Q3SXP7 199 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ZNF718Q3SXZ3 478 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 LCN1P1Q5VSP4 162 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 RAB12Q6IQ22 244 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 SLC16A9Q7RTY1 509 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ASPGQ86U10 573 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 CROCCP3Q8IVE0 287 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 PEX5LQ8IYB4 626 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 TDHQ8IZJ6 230 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 GBP7Q8N8V2 638 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 RNASE8Q8TDE3 154 aaKnown RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 CDHR1Q96JP9 859 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 NACAP1Q9BZK3 213 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 TRIM7Q9C029 511 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 FAM49AQ9H0Q0 323 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 TSPYL1Q9H0U9 437 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 THAP2Q9H0W7 228 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 NAPBQ9H115 298 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 CUEDC2Q9H467 287 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 C5orf66Q9H5L9 145 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 ZNF334Q9HCZ1 680 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 PRMT8Q9NR22 394 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 AKAP7Q9P0M2 348 aaPredicted RBP3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 IL19Q9UHD0 177 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 SLC12A6Q9UHW9 1150 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 TEX264Q9Y6I9 313 aa3.35□□□□□ -1.87
RNU6-28P-201ENST00000362378 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 MAGEB16A2A368 324 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 MTMR11A4FU01 709 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 SLC9B1P1A6NJY1 282 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 SMIM1B2RUZ4 78 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 FPGTO14772 594 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 EPHB6O15197 1021 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 VTNP04004 478 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 RAF1P04049 648 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 SBK2P0C263 348 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 ERVK-10P10266 1014 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 GOT1P17174 413 aa3.34□□□□□ -1.87
RNU6-28P-201ENST00000362378 RBMS1P29558 406 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms