RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CKMT1AP12532 417 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ITGB8P26012 769 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CD96P40200 585 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SLC19A1P41440 591 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 MAGEA2P43356 314 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PREPP48147 710 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 KCNJ5P48544 419 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NUBP1P53384 320 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 EIF6P56537 245 aaKnown RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NFKB2Q00653 900 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 POU4F1Q01851 419 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 IFRD2Q12894 506 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 FAM102BQ5T8I3 360 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 OR4F3Q6IEY1 312 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ZER1Q7Z7L7 766 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 TMEM132CQ8N3T6 1108 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 DCBLD1Q8N8Z6 715 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CREB3L4Q8TEY5 395 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SLC25A46Q96AG3 418 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ZNF583Q96ND8 569 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 MGLLQ99685 303 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CDCA4Q9BXL8 241 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SLC29A3Q9BZD2 475 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NIF3L1Q9GZT8 377 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 DCAF13Q9NV06 445 aaKnown RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SPHK1Q9NYA1 384 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SEC14L4Q9UDX3 406 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CYTH4Q9UIA0 394 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SCP2D1Q9UJQ7 156 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ZNF222Q9UK12 451 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SLC6A14Q9UN76 642 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 FAM95CA0A1B0GW59 222 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NEMP2A6NFY4 417 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 FZD9O00144 591 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SULT1C2O00338 296 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SCAMP3O14828 347 aaKnown RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 AZIN1O14977 448 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PIP5K1BO14986 540 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 HPGDSO60760 199 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NTSR2O95665 410 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 AP2A1O95782 977 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 GLUD1P00367 558 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 IL1AP01583 271 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PRR35P0CG20 571 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SPI1P17947 270 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CALCRP30988 508 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 HOXA9P31269 272 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 RFC3P40938 356 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PXNP49023 591 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PGDP52209 483 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 TEAD4Q15561 434 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 MPEG1Q2M385 716 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PAN3Q58A45 887 aaKnown RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ZNF678Q5SXM1 525 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PKN3Q6P5Z2 889 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 DLEU7Q6UYE1 221 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 C3P1Q6ZMU1 363 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PGAP1Q75T13 922 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CCDC71Q8IV32 467 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 SLC34A3Q8N130 599 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 C12orf45Q8N5I9 185 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 OR52K1Q8NGK4 314 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 AP3S1Q92572 193 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 USP7Q93009 1102 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 FAM162AQ96A26 154 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 ART5Q96L15 291 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 OR2M2Q96R28 347 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 H2AFJQ9BTM1 129 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 CNPPD1Q9BV87 410 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 NKX6-2Q9C056 277 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-203ENST00000361528 PIF1Q9H611 641 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 POLG2Q9UHN1 485 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 STYXL1Q9Y6J8 313 aa11.23□□□□□ -0.61
CNOT4-203ENST00000361528 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.22□□□□□ -0.61
CNOT4-203ENST00000361528 PRAMEF33A0A0G2JMD5 474 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 EFCAB7A8K855 629 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 C9JVG2 144 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 PRAMEF10O60809 474 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 RPS6KA4O75676 772 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 FHP07954 510 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 ZNF806P0C7X5 589 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 PTPRAP18433 802 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 FPR1P21462 350 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 PSMB4P28070 264 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 DNAJA1P31689 397 aaKnown RBP11.22□□□□□ -0.61
CNOT4-203ENST00000361528 ATP5C1P36542 298 aaKnown RBP11.22□□□□□ -0.61
CNOT4-203ENST00000361528 FNTBP49356 437 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 HNMTP50135 292 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 YWHAHQ04917 246 aaPredicted RBP11.22□□□□□ -0.61
CNOT4-203ENST00000361528 NPRL3Q12980 569 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 PRKG2Q13237 762 aa11.22□□□□□ -0.61
CNOT4-203ENST00000361528 CAMK2DQ13557 499 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms