RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 PRAMEF10O60809 474 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 ITGA5P08648 1049 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 ERVK-8P63133 956 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 OGDHQ02218 1023 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 DCAF12L1Q5VU92 463 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 SVOPLQ8N434 492 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 NLGN4YQ8NFZ3 816 aaPredicted RBP16.62■□□□□ 0.25
COL4A2-201ENST00000360467 PLEKHA6Q9Y2H5 1048 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 SPIN1Q9Y657 262 aaPredicted RBP16.62■□□□□ 0.25
COL4A2-201ENST00000360467 GP1BBP13224 206 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 AQP4P55087 323 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 MTTPP55157 894 aa16.62■□□□□ 0.25
COL4A2-201ENST00000360467 HCKP08631 526 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 ELOCQ15369 112 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 SPERTQ8NA61 448 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 GPR62Q9BZJ7 368 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 FLRT1Q9NZU1 646 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 FAM221BA6H8Z2 402 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 LATO43561 262 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 AHSGP02765 367 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 BOLLQ8N9W6 283 aaKnown RBP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 OR2L8Q8NGY9 312 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 DNAJA4Q8WW22 397 aaPredicted RBP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 NTAN1Q96AB6 310 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 NODALQ96S42 347 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 MUC13Q9H3R2 512 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 J3QRK9 145 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 UBQLNLQ8IYU4 475 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 ORAI3Q9BRQ5 295 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 SPHK2Q9NRA0 654 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 GIMAP2Q9UG22 337 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 MANBAO00462 879 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 UPP1Q16831 310 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 RBM48Q5RL73 367 aaKnown RBP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 C12orf40Q86WS4 652 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 JAGN1Q8N5M9 183 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 MED28Q9H204 178 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 C2orf92A0A1B0GVN3 265 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 TRBC2A0A5B9 178 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 OAZ2O95190 189 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 CD2P06729 351 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 SRYQ05066 204 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 GPR17Q13304 367 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 LAPTM4AQ15012 233 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 PTCHD3Q3KNS1 767 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 RNF220Q5VTB9 566 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 TXNDC5Q8NBS9 432 aaKnown RBP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 SMPDL3AQ92484 453 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 WDR12Q9GZL7 423 aaKnown RBP16.61■□□□□ 0.25
COL4A2-201ENST00000360467 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 GRHPRQ9UBQ7 328 aa16.61■□□□□ 0.25
COL4A2-201ENST00000360467 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 HNF1BP35680 557 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PRKCDQ05655 676 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 OLFML1Q6UWY5 402 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 P2RY8Q86VZ1 359 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 NAT8LQ8N9F0 302 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 SCAMP4Q969E2 229 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 C19orf25Q9UFG5 118 aaPredicted RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 MGAT4AQ9UM21 535 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PDE10AQ9Y233 779 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PFKMP08237 780 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 VIPR2P41587 438 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 BEND4Q6ZU67 534 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 Q6ZVL8 140 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 RNF130Q86XS8 419 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 KLHL36Q8N4N3 616 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 OR9A1PQ8NGU1 263 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 SLC35F5Q8WV83 523 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 ASPNQ9BXN1 380 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 ZNF395Q9H8N7 513 aaPredicted RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 IGLON5A6NGN9 336 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 FAM170BA6NMN3 283 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PRPS1L1P21108 318 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PLEKHG6Q3KR16 790 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 SLC35F1Q5T1Q4 408 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PDSS1Q5T2R2 415 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 LGI4Q8N135 537 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 HSPBAP1Q96EW2 488 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 GRHL1Q9NZI5 618 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 TLR4O00206 839 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 CSTBP04080 98 aaKnown RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 DUOXA1Q1HG43 343 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 LYARQ9NX58 379 aaKnown RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PDCD5O14737 125 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 RAP2AP10114 183 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 JUNDP17535 347 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 LASP1Q14847 261 aaKnown RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PLET1Q6UQ28 207 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
COL4A2-201ENST00000360467 PNLDC1Q8NA58 520 aaKnown RBP16.6■□□□□ 0.25
COL4A2-201ENST00000360467 BARD1Q99728 777 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms