RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 DUSP26Q9BV47 211 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 EPHX3Q9H6B9 360 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 TPT1P8Q9HAU6 139 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 SGK2Q9HBY8 427 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 WNT6Q9Y6F9 365 aa6.81□□□□□ -1.32
KCNIP4-201ENST00000359001 COL4A3Q01955 1670 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 TCF20Q9UGU0 1960 aaKnown RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 GABRR3A8MPY1 467 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 KIAA0355O15063 1070 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 AXIN1O15169 862 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 UGT2B11O75310 529 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 JRKO75564 520 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 GCM2O75603 506 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF682O95780 498 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 FABP3P05413 133 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 CISD3P0C7P0 127 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF182P17025 639 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 PTPN2P17706 415 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 HTR1BP28222 390 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 PDHA2P29803 388 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 TIA1P31483 386 aaKnown RBP eCLIP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 PCGF2P35227 344 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 PNLIPRP1P54315 467 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 GP2P55259 537 aaKnown RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 CXCR4P61073 352 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 SLC35A2P78381 396 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 KCNJ10P78508 379 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 PIGFQ07326 219 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 TMEM115Q12893 351 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 BNIP3Q12983 259 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 DDX39BQ13838 428 aaKnown RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 GRIN2CQ14957 1233 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 LAPTM4AQ15012 233 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF829Q3KNS6 432 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 SYTL3Q4VX76 610 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ARHGAP15Q53QZ3 475 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF385BQ569K4 471 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 SPIN4Q56A73 249 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 FAHD1Q6P587 224 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 Q6ZNX1 250 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF621Q6ZSS3 439 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 RTL10Q7L3V2 364 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 TSEN54Q7Z6J9 526 aaKnown RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 B3GNT8Q7Z7M8 397 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZC3H7AQ8IWR0 971 aaKnown RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 NPAS3Q8IXF0 933 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 LRRC56Q8IYG6 542 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 NRSN1Q8IZ57 195 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 BPIFB6Q8NFQ5 453 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 GOT1L1Q8NHS2 421 aaPredicted RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 HUS1BQ8NHY5 278 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 CNIH3Q8TBE1 160 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 FAR1Q8WVX9 515 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 NEIL2Q969S2 332 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 AP2M1Q96CW1 435 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 CXorf40BQ96DE9 158 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 THAP11Q96EK4 314 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 HSPBAP1Q96EW2 488 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 DTD2Q96FN9 168 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 C7orf34Q96L11 122 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ZSWIM3Q96MP5 696 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 SIGLEC11Q96RL6 698 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 DUSP21Q9H596 190 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 EXD2Q9NVH0 621 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 GALNT8Q9NY28 637 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ATP6V1HQ9UI12 483 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ENPP5Q9UJA9 477 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 PSME2Q9UL46 239 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 NDRG4Q9ULP0 352 aaKnown RBP6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 MAPRE3Q9UPY8 281 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ITM2BQ9Y287 266 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 ORC6Q9Y5N6 252 aa6.8□□□□□ -1.32
KCNIP4-201ENST00000359001 hCG_2039718K7EN88 272 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 RNASET2O00584 256 aaKnown RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 XPNPEP2O43895 674 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 NOL3O60936 208 aaKnown RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 MYO1DO94832 1006 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 KLHL18O94889 574 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 GABARAPO95166 117 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 C1orf105O95561 183 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 CPSF4O95639 269 aaKnown RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 ANGPTL1O95841 491 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 SRPRAP08240 638 aaKnown RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 NUDT7P0C024 238 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 ELFN1P0C7U0 828 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 ZNF8P17098 575 aaPredicted RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 PPIBP23284 216 aaKnown RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 MLLT10P55197 1068 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 TPD52P55327 224 aaPredicted RBP6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 GTF2H3Q13889 308 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 ACOX1Q15067 660 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 RGNQ15493 299 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 CTF1Q16619 201 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 MOGQ16653 247 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 ANKDD1AQ495B1 522 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 TMEM220Q6QAJ8 160 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 GALNT5Q7Z7M9 940 aa6.79□□□□□ -1.32
KCNIP4-201ENST00000359001 ANKRD13BQ86YJ7 626 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms