RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 GNG14A0A1W2PPG7 69 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 TGM5O43548 720 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 TSPAN6O43657 245 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 SGTAO43765 313 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ABCB1P08183 1280 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 ANXA4P09525 319 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 PORP16435 677 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 CDH3P22223 829 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 HPCAL1P37235 193 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ETV3P41162 512 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 RECQLP46063 649 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 BDKRB1P46663 353 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 PREPP48147 710 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 SERPINB10P48595 397 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 NCS1P62166 190 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 CREMQ03060 361 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 RELAQ04206 551 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ZNF33BQ06732 778 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 NPRL3Q12980 569 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 VEZF1Q14119 521 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 CYP2A13Q16696 494 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 CCSMST1Q4G0I0 132 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 SYT6Q5T7P8 510 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 CPTPQ5TA50 214 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 GRHL2Q6ISB3 625 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 NIPAL1Q6NVV3 410 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ADCK1Q86TW2 530 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 TMEM25Q86YD3 366 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 CCDC71Q8IV32 467 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ZFP90Q8TF47 636 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 UBE2FQ969M7 185 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 TMEM159Q96B96 161 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 HHIPL1Q96JK4 782 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 FAM210AQ96ND0 272 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ACOT13Q9NPJ3 140 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 CREBZFQ9NS37 354 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 STOX2Q9P2F5 926 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 CCL26Q9Y258 94 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ZNF451Q9Y4E5 1061 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 HELZP42694 1942 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 MGAT4DA6NG13 374 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 SOBPA7XYQ1 873 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 GABRR3A8MPY1 467 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ZSCAN9O15535 394 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 SUV39H1O43463 412 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 PSIP1O75475 530 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 SLCO2B1O94956 709 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 PABPC1P11940 636 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 IMPDH2P12268 514 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ZNF30P17039 623 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 RRM2P31350 389 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 VIPR1P32241 457 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 CRYBA2P53672 197 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 RPP38P78345 283 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 MVKQ03426 396 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 DGUOKQ16854 277 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 PROX2Q3B8N5 592 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.29□□□□□ -1.08
RFX3-202ENST00000358730 TMEM236Q5W0B7 351 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 GPR153Q6NV75 609 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 FAHD1Q6P587 224 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 DDX53Q86TM3 631 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 RAVER1Q8IY67 606 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 LILRA3Q8N6C8 439 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 VPS37AQ8NEZ2 397 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 OR2A12Q8NGT7 310 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ATL1Q8WXF7 558 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 OR4K3Q96R72 315 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ZNF300Q96RE9 604 aaPredicted RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 PITX2Q99697 317 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 RIOK2Q9BVS4 552 aaKnown RBP8.29□□□□□ -1.08
RFX3-202ENST00000358730 SLC46A2Q9BY10 475 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 ADPRHL2Q9NX46 363 aa8.29□□□□□ -1.08
RFX3-202ENST00000358730 C1orf226A1L170 272 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TMEM247A6NEH6 219 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ZBBXA8MT70 800 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 FADS2P1A8MWK0 482 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 H0YIV9 168 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 KPNA4O00629 521 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 PCDHGA12O60330 932 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 AP2A2O94973 939 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 SLC16A8O95907 504 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CATP04040 527 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 CYP2A6P11509 494 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 LAG3P18627 525 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ACVR2AP27037 513 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PBLDP30039 288 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 HNF4AP41235 474 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ASMTP46597 345 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 C21orf58P58505 322 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RAE1P78406 368 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 KCNJ10P78508 379 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 KCNC4Q03721 635 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 BRAT1Q6PJG6 821 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TMPRSS11BQ86T26 416 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 SNX29P2Q8IUI4 249 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RBM12BQ8IXT5 1001 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms