RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SPTBP11277 2137 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 AZIN1O14977 448 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 CSO75390 466 aaKnown RBP24.29■■□□□ 1.48
SSBP3-202ENST00000357475 PCNAP12004 261 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 SCTRP47872 440 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 GPR19Q15760 415 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 ISXQ2M1V0 245 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 SGO1Q5FBB7 561 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 PAGE2BQ5JRK9 111 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 KANK2Q63ZY3 851 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 VN1R4Q7Z5H5 301 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 KRT78Q8N1N4 520 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 WDR20Q8TBZ3 569 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 ZFYVE21Q9BQ24 234 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 RTKNQ9BST9 563 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 ILKAPQ9H0C8 392 aaPredicted RBP24.29■■□□□ 1.48
SSBP3-202ENST00000357475 CCDC134Q9H6E4 229 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 OCIAD1Q9NX40 245 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 HAO1Q9UJM8 370 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 TRAF6Q9Y4K3 522 aa24.29■■□□□ 1.48
SSBP3-202ENST00000357475 PIEZO1Q92508 2521 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 PMS2P1A4D2B8 440 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 H0YIV9 168 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 ENO1P06733 434 aaKnown RBP24.28■■□□□ 1.48
SSBP3-202ENST00000357475 KITP10721 976 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 CCKBRP32239 447 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 GRK3P35626 688 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 ARL4DP49703 201 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 LAPTM5Q13571 262 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 DDX39BQ13838 428 aaKnown RBP24.28■■□□□ 1.48
SSBP3-202ENST00000357475 NAA25Q14CX7 972 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 UGT3A2Q3SY77 523 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 KMT5CQ86Y97 462 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 MCATQ8IVS2 390 aaKnown RBP24.28■■□□□ 1.48
SSBP3-202ENST00000357475 LAS2Q8IYD9 372 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 MFSD9Q8NBP5 474 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 TMEM74Q96NL1 305 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 SARGQ9BW04 601 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 TUBB1Q9H4B7 451 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 STARD5Q9NSY2 213 aa24.28■■□□□ 1.48
SSBP3-202ENST00000357475 H0YGG7 62 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 MANBAO00462 879 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 P2RX6O15547 441 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 CRCPO75575 148 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 TBX6O95947 436 aaPredicted RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 JUNP05412 331 aaKnown RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 FGF4P08620 206 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 ARF3P61204 181 aaPredicted RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 RPS15AP62244 130 aaKnown RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 SNRPNP63162 240 aaKnown RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 TRA2AQ13595 282 aaKnown RBP eCLIP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 HUS1BQ8NHY5 278 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 RNF31Q96EP0 1072 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 MTERF1Q99551 399 aaKnown RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 CHRNA10Q9GZZ6 450 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 SIDT1Q9NXL6 827 aaKnown RBP24.27■■□□□ 1.48
SSBP3-202ENST00000357475 CLCA2Q9UQC9 943 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 DNAJC15Q9Y5T4 150 aa24.27■■□□□ 1.48
SSBP3-202ENST00000357475 A0A1W2PNU3 283 aaPredicted RBP24.26■■□□□ 1.47
SSBP3-202ENST00000357475 FAM149AA5PLN7 773 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 PDYNP01213 254 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 CXCR2P25025 360 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 HMOX2P30519 316 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 RPL14P50914 215 aaKnown RBP24.26■■□□□ 1.47
SSBP3-202ENST00000357475 VSX2P58304 361 aaPredicted RBP24.26■■□□□ 1.47
SSBP3-202ENST00000357475 ABRAXAS2Q15018 415 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 FRG2Q64ET8 278 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 CREB3L4Q8TEY5 395 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 C7orf26Q96N11 449 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 FRG2BQ96QU4 278 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 SLC29A3Q9BZD2 475 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 NT5DC2Q9H857 520 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 PCDHGA11Q9Y5H2 935 aa24.26■■□□□ 1.47
SSBP3-202ENST00000357475 SH3BGRLO75368 114 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 UROSP10746 265 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 CCL4P13236 92 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 RELAQ04206 551 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 HIST2H2ACQ16777 129 aaPredicted RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 HIST2H2AA3Q6FI13 130 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 CLYBLQ8N0X4 340 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 AICDAQ9GZX7 198 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 RHBGQ9H310 441 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 ELOVL6Q9H5J4 265 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 ZFP69BQ9UJL9 534 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 EDF1O60869 148 aaKnown RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 SKAP2O75563 359 aaPredicted RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 EIF2S1P05198 315 aaKnown RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 SERPIND1P05546 499 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 CDK4P11802 303 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 GNGT1P63211 74 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 HKDC1Q2TB90 917 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 LRRC34Q8IZ02 419 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 ZNF473Q8WTR7 871 aaKnown RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 TWIST2Q8WVJ9 160 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 USP7Q93009 1102 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 ZNF317Q96PQ6 595 aaPredicted RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 PITHD1Q9GZP4 211 aaPredicted RBP24.25■■□□□ 1.47
SSBP3-202ENST00000357475 PLCL2Q9UPR0 1127 aa24.25■■□□□ 1.47
SSBP3-202ENST00000357475 AP1M2Q9Y6Q5 423 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms