RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PAICSP22234 425 aaKnown RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ACP1P24666 158 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ZXDBP98169 803 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ROR2Q01974 943 aaKnown RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 SP3Q02447 781 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 GBE1Q04446 702 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 SLC20A2Q08357 652 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TAF10Q12962 218 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 NPTX1Q15818 432 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 RABL6Q3YEC7 729 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 BOLA3Q53S33 107 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CMPK2Q5EBM0 449 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CCDC183Q5T5S1 534 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 KLC3Q6P597 504 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 GRASPQ7Z6J2 395 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 MEX3DQ86XN8 651 aaKnown RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 WDR49Q8IV35 697 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 MINDY2Q8NBR6 621 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 OR4K1Q8NGD4 311 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM186Q96B77 213 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 FAM84BQ96KN1 310 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TOX2Q96NM4 488 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 IWS1Q96ST2 819 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ANP32EQ9BTT0 268 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ZSCAN5AQ9BUG6 496 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 PRRG4Q9BZD6 226 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 VN1R1Q9GZP7 353 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 C17orf75Q9HAS0 396 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 RDH8Q9NYR8 311 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 AIPL1Q9NZN9 384 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TXNDC16Q9P2K2 825 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 HPCAL4Q9UM19 191 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF510Q9Y2H8 683 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 AFF2P51816 1311 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ATRNO75882 1429 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 GLI3P10071 1580 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 SH3PXD2BA1X283 911 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 OR5K3A6NET4 321 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 C17orf105B2RV13 164 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 F8VVB4 439 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 F8VWA3 439 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 RASGRF2O14827 1237 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TNFRSF13BO14836 293 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CHADO15335 359 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ATP6V1G1O75348 118 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 SOX30O94993 753 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CLDN14O95500 239 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CCDC192P0DO97 292 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CETPP11597 493 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 NR1D1P20393 614 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 HNRNPA2B1P22626 353 aaKnown RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 PTGER3P43115 390 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 MTTPP55157 894 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ACTR1AP61163 376 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 MBTD1Q05BQ5 628 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 OVGP1Q12889 678 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ITPRIPL2Q3MIP1 535 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 OR7E24Q6IFN5 339 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 RHBDF2Q6PJF5 856 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF788Q6ZQV5 615 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 PIWIL4Q7Z3Z4 852 aaKnown RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM219Q86XT9 240 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CDK20Q8IZL9 346 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CCDC110Q8TBZ0 833 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 UBLCP1Q8WVY7 318 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 P2RX5Q93086 422 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 MTERF3Q96E29 417 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 NSMCE2Q96MF7 247 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 NEDD4LQ96PU5 975 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 EGFL8Q99944 293 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CDK19Q9BWU1 502 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TM6SF1Q9BZW5 370 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 DDX47Q9H0S4 455 aaKnown RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 RAB17Q9H0T7 212 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ROPN1Q9HAT0 212 aaPredicted RBP1.53□□□□□ -2.16
BRCA1-202ENST00000354071 CD93Q9NPY3 652 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 FAM118AQ9NWS6 357 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TMOD3Q9NYL9 352 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 TRRAPQ9Y4A5 3859 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 PTPRCP08575 1304 aa1.53□□□□□ -2.16
BRCA1-202ENST00000354071 ABCA9Q8IUA7 1624 aa1.53□□□□□ -2.17
BRCA1-202ENST00000354071 IQGAP1P46940 1657 aa1.53□□□□□ -2.17
BRCA1-202ENST00000354071 FBN2P35556 2912 aa1.53□□□□□ -2.17
BRCA1-202ENST00000354071 MROH2BQ7Z745 1585 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NPC1L1Q9UHC9 1359 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LINC01548A6NM66 108 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SRRM3A6NNA2 597 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GAPDHSO14556 408 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 KLHL41O60662 606 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TM7SF2O76062 418 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 IGLV2-14P01704 120 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TPM2P07951 284 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CLUP10909 449 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 EPB41P11171 864 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CEACAM1P13688 526 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CPA3P15088 417 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 WT1P19544 449 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 MARCKSP29966 332 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PRDX2P32119 198 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 AVPR1BP47901 424 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms