RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 PHEXP78562 749 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 HMGCS1Q01581 520 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 CSTF3Q12996 717 aaKnown RBP19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 USP53Q70EK8 1073 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 ALYREFQ86V81 257 aaKnown RBP19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 BAHD1Q8TBE0 780 aaPredicted RBP19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 TGM7Q96PF1 710 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 MAP3K3Q99759 626 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 ACPTQ9BZG2 426 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 RP1P56715 2156 aa19.28■□□□□ 0.68
SIGMAR1-202ENST00000353468 E9PBE3 544 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 KLHL41O60662 606 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 PEX11AO75192 247 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 LDOC1O95751 146 aaPredicted RBP19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 CD59P13987 128 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 PIK3CBP42338 1070 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 RPS13P62277 151 aaKnown RBP19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 CFHR1Q03591 330 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 NR6A1Q15406 480 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 ATP6AP1LQ52LC2 224 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 FBXO42Q6P3S6 717 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 PRR23CQ6ZRP0 262 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 FAM92BQ6ZTR7 304 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 VN1R5Q7Z5H4 357 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 PLXDC1Q8IUK5 500 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 TTLQ8NG68 377 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 IFI44Q8TCB0 444 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 CNDP2Q96KP4 475 aaKnown RBP19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 TRAPPC9Q96Q05 1148 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 CD180Q99467 661 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 CCDC3Q9BQI4 270 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 GIMAP2Q9UG22 337 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 ASXL3Q9C0F0 2248 aa19.27■□□□□ 0.68
SIGMAR1-202ENST00000353468 TLCD2A6NGC4 264 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 LSM1O15116 133 aaKnown RBP19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 PRR35P0CG20 571 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 HOXB3P14651 431 aaPredicted RBP19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 EZRP15311 586 aaKnown RBP19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 ST6GAL1P15907 406 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 LBPP18428 481 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 TGM1P22735 817 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 SERPINB1P30740 379 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 BCL6P41182 706 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 RPS15AP62244 130 aaKnown RBP19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 RELAQ04206 551 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 SQSTM1Q13501 440 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 METTL21CQ5VZV1 264 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 PPP3R2Q96LZ3 170 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 ZMYND15Q9H091 742 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 DMRT3Q9NQL9 472 aa19.27■□□□□ 0.67
SIGMAR1-202ENST00000353468 UNC13CQ8NB66 2214 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 SLC9B1P1A6NJY1 282 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 KIF1CO43896 1103 aaKnown RBP19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 PRAMEF10O60809 474 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 RSL1D1O76021 490 aaKnown RBP19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 C9P02748 559 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 CKMT2P17540 419 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 AHRP35869 848 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 CYP4F2P78329 520 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 CCL7P80098 99 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 ZIC1Q15915 447 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 AP5B1Q2VPB7 878 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 AASDHQ4L235 1098 aaPredicted RBP19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 SPDYAQ5MJ70 313 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 WDR74Q6RFH5 385 aaPredicted RBP19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 MTDHQ86UE4 582 aaKnown RBP19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 C19orf47Q8N9M1 422 aaKnown RBP19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 MFSD9Q8NBP5 474 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 VPS29Q9UBQ0 182 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 ZFP69BQ9UJL9 534 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 PILRAQ9UKJ1 303 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 PPT2Q9UMR5 302 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 SLC12A4Q9UP95 1085 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 TRIM33Q9UPN9 1127 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 PCDHGA4Q9Y5G9 962 aa19.26■□□□□ 0.67
SIGMAR1-202ENST00000353468 NPIPB8E9PQR5 432 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 CASC3O15234 703 aaKnown RBP19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 SH3BP5O60239 455 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 CTSVO60911 334 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 DCTN3O75935 186 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 TGFB1P01137 390 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 SERPINA6P08185 405 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 NCF2P19878 526 aaPredicted RBP19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 PRPH2P23942 346 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 GSTM2P28161 218 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 CSF2RBP32927 897 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 CYP4F3Q08477 520 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 GALNTL6Q49A17 601 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 C6orf136Q5SQH8 315 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 TMEM198Q66K66 360 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 FCRL4Q96PJ5 515 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 LRRN3Q9H3W5 708 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 LRTM1Q9HBL6 345 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 C1orf109Q9NX04 203 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 FTSJ1Q9UET6 329 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 KLHL3Q9UH77 587 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 AP1M2Q9Y6Q5 423 aa19.25■□□□□ 0.67
SIGMAR1-202ENST00000353468 A0A0J9YVX5 310 aa19.24■□□□□ 0.67
SIGMAR1-202ENST00000353468 A0A1W2PQM1 296 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms