RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 WASH4PA8MWX3 477 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 FAM155AB1AL88 458 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 hCG_2039718K7EN88 272 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 B4GALT4O60513 344 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 PAPSS2O95340 614 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 TGM1P22735 817 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 FSHRP23945 695 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 RPL4P36578 427 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 MLLT6P55198 1093 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 MRPS5P82675 430 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 MADCAM1Q13477 382 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 AANATQ16613 207 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 TRMT10BQ6PF06 316 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 CSGALNACT1Q8TDX6 532 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 KCNJ9Q92806 393 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 CHFRQ96EP1 664 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 SEPT5Q99719 369 aaPredicted RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 FTHL17Q9BXU8 183 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 MCCC2Q9HCC0 563 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 THUMPD1Q9NXG2 353 aaKnown RBP4.9□□□□□ -1.62
SKP1-202ENST00000353411 RNF11Q9Y3C5 154 aa4.9□□□□□ -1.62
SKP1-202ENST00000353411 A0A1B0GVC2 190 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 TP53P04637 393 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 ADH6P28332 368 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 PNPLA4P41247 253 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 FUT2Q10981 343 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 TBCEQ15813 527 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 IFI44LQ53G44 452 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 CYBRD1Q53TN4 286 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 C4orf19Q8IY42 314 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.9□□□□□ -1.635e-46■■□□□ 14
SKP1-202ENST00000353411 CHAC2Q8WUX2 184 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 PIGKQ92643 395 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 RPL3LQ92901 407 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 DUS3LQ96G46 650 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 KREMEN1Q96MU8 473 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 KCNC2Q96PR1 638 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 OR2M4Q96R27 311 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 SLC19A3Q9BZV2 496 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 DDIT4Q9NX09 232 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 DOCK10Q96BY6 2186 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 NFASCO94856 1347 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 A0A0G2JMP0 313 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 E5RJQ4 531 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 RGS9O75916 674 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 SLITRK3O94933 977 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 UNGP13051 313 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 PAX6P26367 422 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 WEE1P30291 646 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 SERPINF1P36955 418 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 TGM4P49221 684 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 AADACL4Q5VUY2 407 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 FAM131BQ86XD5 332 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ADGRG3Q86Y34 549 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 NAT16Q8N8M0 369 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 GMCL1P1Q8NEA9 526 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 OR4M2Q8NGB6 313 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 FCAMRQ8WWV6 532 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 FCRL4Q96PJ5 515 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 PIGMQ9H3S5 423 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 C11orf16Q9NQ32 467 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 TMEM184CQ9NVA4 438 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 CLEC4AQ9UMR7 237 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 BOLA1Q9Y3E2 137 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 NEDD8-MDP1E9PL57 170 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 TLR4O00206 839 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 FPGTO14772 594 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 SC5DO75845 299 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 HOXB1P14653 301 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 CCR10P46092 362 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 HSPA7P48741 367 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 E2F1Q01094 437 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 CAMK2GQ13555 558 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 FAM69AQ5T7M9 428 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 COL13A1Q5TAT6 717 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 QSOX2Q6ZRP7 698 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 BEND5Q7L4P6 421 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 SPPL2BQ8TCT7 592 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ACOT11Q8WXI4 607 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 TAAR8Q969N4 342 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 SCGB3A2Q96PL1 93 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 SOX17Q9H6I2 414 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 LRTM1Q9HBL6 345 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 C14orf105Q9NVL8 296 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 RBM22Q9NW64 420 aaKnown RBP eCLIP4.9□□□□□ -1.638e-8■■■■□ 22.7
SKP1-202ENST00000353411 TMEM248Q9NWD8 314 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ABT1Q9ULW3 272 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 DOPEY2Q9Y3R5 2298 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 CHD3Q12873 2000 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 FAM208AQ9UK61 1670 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 ZNF98A6NK75 572 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 CXorf49A8MYA2 514 aaPredicted RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 ZBTB14O43829 449 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 LRCH4O75427 683 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 EEDO75530 441 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 CREG1O75629 220 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 IL3P08700 152 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ARSBP15848 533 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ASMTP46597 345 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms