RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 PNPLA2Q96AD5 504 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 RMDN2Q96LZ7 410 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 SMAD5Q99717 465 aaKnown RBP9.36□□□□□ -0.91
MRPL55-204ENST00000348259 TUBB6Q9BUF5 446 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 NUDT9Q9BW91 350 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 SPATA16Q9BXB7 569 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 TMEM120AQ9BXJ8 343 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ERVK-6Q9BXR3 956 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ING2Q9H160 280 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ALG9Q9H6U8 611 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ACTR5Q9H9F9 607 aaPredicted RBP9.36□□□□□ -0.91
MRPL55-204ENST00000348259 EML4Q9HC35 981 aaKnown RBP9.36□□□□□ -0.91
MRPL55-204ENST00000348259 POT1Q9NUX5 634 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 GALPQ9UBC7 116 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 VTI1BQ9UEU0 232 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 DNAJC16Q9Y2G8 782 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ZNF451Q9Y4E5 1061 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 ANKRD12Q6UB98 2062 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 DOCK10Q96BY6 2186 aa9.36□□□□□ -0.91
MRPL55-204ENST00000348259 MDC1Q14676 2089 aaKnown RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 MTORP42345 2549 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 A0A0G2JND7 137 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ARGFXA6NJG6 315 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 MATN2O00339 956 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 GPR39O43194 453 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 SNX2O60749 519 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 LYPLA1O75608 230 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ATP5HO75947 161 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 SLC25A14O95258 325 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 GSTM1P09488 218 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 CCNYL3P0C7X3 344 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ENO3P13929 434 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ATP1B2P14415 290 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 AQP5P55064 265 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 GSTM4Q03013 218 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 BNIP1Q12981 228 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 GPR18Q14330 331 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 OR4D1Q15615 310 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 KHDC1Q4VXA5 237 aaKnown RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ARL13AQ5H913 290 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 CFAP157Q5JU67 520 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ZNF678Q5SXM1 525 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ZNF648Q5T619 568 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 CACHD1Q5VU97 1274 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 METTL21CQ5VZV1 264 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 TTC23LQ6PF05 361 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 FRMD7Q6ZUT3 714 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 NEK10Q6ZWH5 1172 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ADAMTSL2Q86TH1 951 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
MRPL55-204ENST00000348259 PHYKPLQ8IUZ5 450 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 HOMEZQ8IX15 550 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ZBTB2Q8N680 514 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 FDCSPQ8NFU4 85 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 C19orf60Q96EN9 201 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 FAR2Q96K12 515 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 LRFN5Q96NI6 719 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 SLC30A3Q99726 388 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 TIMM29Q9BSF4 260 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 MYLK2Q9H1R3 596 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 TRIM39Q9HCM9 518 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 SAR1AQ9NR31 198 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 KLC4Q9NSK0 619 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ABCF3Q9NUQ8 709 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 SLC12A4Q9UP95 1085 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 PRSS21Q9Y6M0 314 aa9.35□□□□□ -0.91
MRPL55-204ENST00000348259 ZGRF1Q86YA3 2104 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 HDAC3O15379 428 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 DPM1O60762 260 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 HNRNPCL1O60812 293 aaKnown RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 CCDC22O60826 627 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 FGF4P08620 206 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 ELAVL4P26378 380 aaKnown RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 AOAHP28039 575 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 RORAP35398 523 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 CCL11P51671 97 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 ALDH18A1P54886 795 aaKnown RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 ITGA1P56199 1179 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 CORO7P57737 925 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 TUBB3Q13509 450 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 KCNAB1Q14722 419 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 PLEKHS1Q5SXH7 462 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 EPGNQ6UW88 154 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 FAM198BQ6UWH4 519 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 CYHR1Q6ZMK1 362 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 FAM92BQ6ZTR7 304 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 GPSM1Q86YR5 675 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 RBM12BQ8IXT5 1001 aaKnown RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 CPNE9Q8IYJ1 553 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 D2HGDHQ8N465 521 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 CLDN19Q8N6F1 224 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 GLYATL1Q969I3 302 aa9.34□□□□□ -0.91
MRPL55-204ENST00000348259 ZNF501Q96CX3 271 aaPredicted RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 SNRNP40Q96DI7 357 aaKnown RBP9.34□□□□□ -0.91
MRPL55-204ENST00000348259 LINGO1Q96FE5 620 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms