RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 POLR2J2Q9GZM3 115 aaKnown RBP14.3□□□□□ -0.12
NUP50-201ENST00000347635 SLC22A4Q9H015 551 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 ISPDA4D126 451 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 GRXCR2A6NFK2 248 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 PDYNP01213 254 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 BMXP51813 675 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 STX4Q12846 297 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
NUP50-201ENST00000347635 CYBRD1Q53TN4 286 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 XAGE5Q8WWM1 108 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 TRIB3Q96RU7 358 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 MAPKAP1Q9BPZ7 522 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 BCL7BQ9BQE9 202 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 SUV39H2Q9H5I1 410 aa14.3□□□□□ -0.12
NUP50-201ENST00000347635 CCDC177Q9NQR7 707 aaPredicted RBP14.3□□□□□ -0.12
NUP50-201ENST00000347635 OPRL1P41146 370 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 DPP6P42658 865 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 CD47Q08722 323 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 FCHO2Q0JRZ9 810 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 FAM171BQ6P995 826 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 IRF7Q92985 503 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 CDCA3Q99618 268 aaPredicted RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 AIF1LQ9BQI0 150 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 TLR4O00206 839 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 BCAS1O75363 584 aaPredicted RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 ITGB1P05556 798 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 CENPAP49450 140 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 HTR6P50406 440 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 MADCAM1Q13477 382 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 TCEA2Q15560 299 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 HERVK_113Q902F9 699 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 NT5C3BQ969T7 300 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 CXCL16Q9H2A7 254 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 PMF1-BGLAPU3KQ54 211 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 EDDM13A0A1B0GTR0 161 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 SNX4O95219 450 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 SRPRAP08240 638 aaKnown RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 MAPK12P53778 367 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 PAQR9Q6ZVX9 377 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 IGFN1Q86VF2 1251 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 RETREG3Q86VR2 466 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 ZNF675Q8TD23 568 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 SLC38A4Q969I6 547 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 ARNT2Q9HBZ2 717 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 TVP23BQ9NYZ1 205 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 PLOD2O00469 737 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 B4GAT1O43505 415 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 LDB2O43679 373 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 CTSAP10619 480 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 CD72P21854 359 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 C18orf21Q32NC0 220 aaPredicted RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 PLA2G4EQ3MJ16 856 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 LRRC73Q5JTD7 316 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 ANKRD26P1Q6NSI1 321 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 SHQ1Q6PI26 577 aaKnown RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 PLEKHG7Q6ZR37 379 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 SPARTQ8N0X7 666 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 OR2AP1Q8NGE2 309 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 EXOSC8Q96B26 276 aaKnown RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 ENPP5Q9UJA9 477 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 RIMKLBQ9ULI2 386 aa14.29□□□□□ -0.12
NUP50-201ENST00000347635 MRPS7Q9Y2R9 242 aaKnown RBP14.29□□□□□ -0.12
NUP50-201ENST00000347635 M0QX08 132 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 SSNA1O43805 119 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 GDI1P31150 447 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 NFATC2Q13469 925 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 TEAD2Q15562 447 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 VMACQ2NL98 169 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 NHSL2Q5HYW2 709 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 GDPD4Q6W3E5 623 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 ZNF730Q6ZMV8 503 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 SPRED1Q7Z699 444 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 NPAS3Q8IXF0 933 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 UBXN10Q96LJ8 280 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 SLC30A2Q9BRI3 323 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 LMAN2LQ9H0V9 348 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 MIR1-1HGQ9H1L0 117 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 A0A1W2PRB8 838 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 LEFTY2O00292 366 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 HOXD8P13378 290 aaPredicted RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 PRG2P13727 222 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 HSPB3Q12988 150 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 TARDBPQ13148 414 aaKnown RBP eCLIP14.28□□□□□ -0.12
NUP50-201ENST00000347635 CEP68Q76N32 757 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 THOC6Q86W42 341 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 C2orf73Q8N5S3 287 aaPredicted RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 NFKBIDQ8NI38 313 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 FRS2Q8WU20 508 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 FERD3LQ96RJ6 166 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 CITED4Q96RK1 184 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 MRPL39Q9NYK5 338 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 COLEC10Q9Y6Z7 277 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 ALDH3B2P48448 385 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 RPP38P78345 283 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 HMBOX1Q6NT76 420 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 LETMD1Q6P1Q0 360 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms