RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CYB5D1Q6P9G0 228 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 NUDCD3Q8IVD9 361 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 FOPNLQ96NB1 174 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 RAB11FIP5Q9BXF6 653 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 NLNQ9BYT8 704 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 CCDC68Q9H2F9 335 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 ENAMQ9NRM1 1142 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 KCND3Q9UK17 655 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 COMMD10Q9Y6G5 202 aa15.36■□□□□ 0.05
RAB5C-201ENST00000346213 A0A096LPK6 155 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CCT8L1PA6NM43 557 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 HAT1O14929 419 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CATP04040 527 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 PROCP04070 461 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 C2P06681 752 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 UMODP07911 640 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ENO3P13929 434 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 PLA2G2AP14555 144 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 BGNP21810 368 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 EFNA3P52797 238 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 VSX2P58304 361 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TAS2R39P59534 338 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TBPL1P62380 186 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ILF2Q12905 390 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TSTA3Q13630 321 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TTLL9Q3SXZ7 439 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CCDC153Q494R4 210 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ICE2Q659A1 982 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ATG16L1Q676U5 607 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 SLC22A18Q96BI1 424 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ABHD17AQ96GS6 310 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 UNKQ9C0B0 810 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CAB39LQ9H9S4 337 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ZNF71Q9NQZ8 489 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 MRPS2Q9Y399 296 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 RRP15Q9Y3B9 282 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 FITM1A5D6W6 292 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 RAB40ALP0C0E4 278 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 PPP1R3AQ16821 1122 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 HKDC1Q2TB90 917 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 MRPL14Q6P1L8 145 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TTC23LQ6PF05 361 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CCDC121Q6ZUS5 278 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TTLL10Q6ZVT0 673 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 PTRH1Q86Y79 214 aaKnown RBP15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CCDC63Q8NA47 563 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 SMPDL3AQ92484 453 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CCT6BQ92526 530 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ARHGAP9Q9BRR9 750 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 EFHD1Q9BUP0 239 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 MECRQ9BV79 373 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 GPR87Q9BY21 358 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 ATG10Q9H0Y0 220 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TAS2R13Q9NYV9 303 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 TMEM216Q9P0N5 145 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 KLHL14Q9P2G3 628 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 CTSFQ9UBX1 484 aa15.35■□□□□ 0.05
RAB5C-201ENST00000346213 COL6A6A6NMZ7 2263 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 H0YGG7 62 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 CDC7O00311 574 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 FFAR3O14843 346 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 GPR42O15529 346 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 KDM1AO60341 852 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 TGDSO95455 350 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 COL6A2P12110 1019 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 OR1D4P47884 311 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 ARF3P61204 181 aaPredicted RBP15.34■□□□□ 0.05
RAB5C-201ENST00000346213 C19orf57Q0VDD7 668 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 SF3A3Q12874 501 aaKnown RBP eCLIP15.34■□□□□ 0.057e-12■■■■■ 31.3
RAB5C-201ENST00000346213 USP10Q14694 798 aaKnown RBP15.34■□□□□ 0.05
RAB5C-201ENST00000346213 ARHGAP19Q14CB8 494 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 PRTGQ2VWP7 1150 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 C18orf21Q32NC0 220 aaPredicted RBP15.34■□□□□ 0.05
RAB5C-201ENST00000346213 NKAIN1Q4KMZ8 207 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 WASHC2DQ5SRD0 308 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 SBSNQ6UWP8 590 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 SYVN1Q86TM6 617 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 GPR135Q8IZ08 494 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 PLD6Q8N2A8 252 aaKnown RBP15.34■□□□□ 0.05
RAB5C-201ENST00000346213 SPATA6LQ8N4H0 392 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 APOBEC4Q8WW27 367 aaKnown RBP15.34■□□□□ 0.05
RAB5C-201ENST00000346213 OR2A5Q96R48 311 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 OR4K3Q96R72 315 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 MACROD1Q9BQ69 325 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 SPNS1Q9H2V7 528 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 TLK1Q9UKI8 766 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 TP53TG5Q9Y2B4 290 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 VWA7Q9Y334 891 aa15.34■□□□□ 0.05
RAB5C-201ENST00000346213 FAM95CA0A1B0GW59 222 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 EIF4E1BA6NMX2 242 aaKnown RBP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 TARM1B6A8C7 271 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 B8ZZF3 427 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 KLK3P07288 261 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 ZNF37AP17032 561 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-201ENST00000346213 CCR10P46092 362 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 CORO7P57737 925 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 POU4F1Q01851 419 aa15.33■□□□□ 0.04
RAB5C-201ENST00000346213 PRDX1Q06830 199 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms