RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 CCNL2Q96S94 520 aaPredicted RBP16.44■□□□□ 0.22
CDK11B-201ENST00000340677 ADI1Q9BV57 179 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 REG4Q9BYZ8 158 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 SLIRPQ9GZT3 109 aaKnown RBP16.44■□□□□ 0.22
CDK11B-201ENST00000340677 SSU72Q9NP77 194 aaKnown RBP16.44■□□□□ 0.22
CDK11B-201ENST00000340677 SDHAF2Q9NX18 166 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 AGAP5A6NIR3 686 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 SDR42E2A6NKP2 422 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 RHPN2P1A8MT19 583 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 J3QW42 95 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 AHSGP02765 367 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 MSX2P35548 267 aaPredicted RBP16.44■□□□□ 0.22
CDK11B-201ENST00000340677 STX4Q12846 297 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 LMAN2Q12907 356 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 ASAH1Q13510 395 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 FAM189A2Q15884 450 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 KCNA10Q16322 511 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 MICAQ29983 383 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 LRRC26Q2I0M4 334 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 SEL1L2Q5TEA6 688 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 NUDT13Q86X67 352 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 C2orf88Q9BSF0 95 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 TRIM2Q9C040 744 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 WHRNQ9P202 907 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 MAP10Q9P2G4 905 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 CDY2AQ9Y6F7 541 aa16.44■□□□□ 0.22
CDK11B-201ENST00000340677 MOXD2PA6NHM9 499 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 DLGAP1O14490 977 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 STX7O15400 261 aaKnown RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 HPGDSO60760 199 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 ALDH4A1P30038 563 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 COILP38432 576 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 POU4F1Q01851 419 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 SNTB1Q13884 538 aaKnown RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 TMEM132DQ14C87 1099 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 PAN2Q504Q3 1202 aaKnown RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 JADE1Q6IE81 842 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 ZBTB49Q6ZSB9 765 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 CAMKMTQ7Z624 323 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 LHFPL3Q86UP9 236 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 TMEM192Q8IY95 271 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 OR8J2Q8NGG1 315 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 CASD1Q96PB1 797 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 NUDT19A8MXV4 375 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 SOCS2O14508 198 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 UGT2B17O75795 530 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 ALPLP05186 524 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 TPH1P17752 444 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 SPI1P17947 270 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 TGM2P21980 687 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 XPAP23025 273 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 ATXN3P54252 364 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 FMO1Q01740 532 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 INPP5AQ14642 412 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 TMEM35AQ53FP2 167 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 GDF6Q6KF10 455 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 REPS1Q96D71 796 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 TREX2Q9BQ50 279 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 SEBOXQ9HB31 216 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 IL1RAPQ9NPH3 570 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 INTS10Q9NVR2 710 aaKnown RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 GHRLQ9UBU3 117 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 KLHL21Q9UJP4 597 aa16.43■□□□□ 0.22
CDK11B-201ENST00000340677 GPR55Q9Y2T6 319 aaPredicted RBP16.43■□□□□ 0.22
CDK11B-201ENST00000340677 B4E171 279 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 HCRTR2O43614 444 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 C9P02748 559 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 MAT2AP31153 395 aaKnown RBP16.42■□□□□ 0.22
CDK11B-201ENST00000340677 BRCC3P46736 316 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 OSTNP61366 133 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 MS4A2Q01362 244 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 CSTF1Q05048 431 aaKnown RBP16.42■□□□□ 0.22
CDK11B-201ENST00000340677 ZNF699Q32M78 642 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 FRMPD2BQ6IN97 320 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 VITQ6UXI7 678 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 SLC47A2Q86VL8 602 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 CHSY1Q86X52 802 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 OFCC1Q8IZS5 231 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 STPG2Q8N412 459 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 C12orf45Q8N5I9 185 aaPredicted RBP16.42■□□□□ 0.22
CDK11B-201ENST00000340677 CEP76Q8TAP6 659 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 FAR1Q8WVX9 515 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 SORT1Q99523 831 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 UNKLQ9H9P5 680 aaKnown RBP16.42■□□□□ 0.22
CDK11B-201ENST00000340677 ZSCAN32Q9NX65 697 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 SIX4Q9UIU6 781 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 RFPL4AA6NLU0 287 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 MPTX1A8MV57 137 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 RFPL4AL1F8VTS6 287 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 ATP5A1P25705 553 aaKnown RBP16.42■□□□□ 0.22
CDK11B-201ENST00000340677 CRATP43155 626 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 FAAP100Q0VG06 881 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 ELP2Q6IA86 826 aa16.42■□□□□ 0.22
CDK11B-201ENST00000340677 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms