RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 B3GNT3Q9Y2A9 372 aa16.17■□□□□ 0.18
BRCC3-202ENST00000340647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRCC3-202ENST00000340647 SPTAN1Q13813 2472 aaKnown RBP16.17■□□□□ 0.18
BRCC3-202ENST00000340647 OR2W5A6NFC9 320 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 CXorf49A8MYA2 514 aaPredicted RBP16.16■□□□□ 0.18
BRCC3-202ENST00000340647 CDC7O00311 574 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 RAD51CO43502 376 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 BMP10O95393 424 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 ZNF37AP17032 561 aaPredicted RBP16.16■□□□□ 0.18
BRCC3-202ENST00000340647 ITGA3P26006 1051 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 IL2P60568 153 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 MEF2AQ02078 507 aaPredicted RBP16.16■□□□□ 0.18
BRCC3-202ENST00000340647 OCA2Q04671 838 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 MGAT5Q09328 741 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 FAM45BPQ6NSW5 357 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 TMEM205Q6UW68 189 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 ZNF740Q8NDX6 193 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 SPATA4Q8NEY3 305 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 FAM45AQ8TCE6 357 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 SARGQ9BW04 601 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 ZNF160Q9HCG1 818 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 ASF1BQ9NVP2 202 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 RNF14Q9UBS8 474 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 CORO1CQ9ULV4 474 aaPredicted RBP16.16■□□□□ 0.18
BRCC3-202ENST00000340647 PCDHGA10Q9Y5H3 936 aa16.16■□□□□ 0.18
BRCC3-202ENST00000340647 LOC102723996A0A087X1L8 192 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 HPP00738 406 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 HRH2P25021 359 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 SSTR1P30872 391 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 EMP2P54851 167 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 RPS15AP62244 130 aaKnown RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 MRPL49Q13405 166 aaKnown RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 PDAP1Q13442 181 aaKnown RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 PCOLCEQ15113 449 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 CATSPEREQ5SY80 951 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 DUPD1Q68J44 220 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 STRA8Q7Z7C7 330 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 SLC26A11Q86WA9 606 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 CISD2Q8N5K1 135 aaKnown RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 RERGQ96A58 199 aaPredicted RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 ALKBH8Q96BT7 664 aaKnown RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 FBXL8Q96CD0 374 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 THOC3Q96J01 351 aaKnown RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 ERP44Q9BS26 406 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 AICDAQ9GZX7 198 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 LHPPQ9H008 270 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 PCBD2Q9H0N5 130 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 MKKSQ9NPJ1 570 aaPredicted RBP16.15■□□□□ 0.18
BRCC3-202ENST00000340647 SLAMF7Q9NQ25 335 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 CDC14AQ9UNH5 594 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 SVILO95425 2214 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 POLEQ07864 2286 aa16.15■□□□□ 0.18
BRCC3-202ENST00000340647 IGHV1-45A0A0A0MS14 117 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 FAM95CA0A1B0GW59 222 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 SEMA7AO75326 666 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 NSA2O95478 260 aaKnown RBP16.14■□□□□ 0.17
BRCC3-202ENST00000340647 ACPPP15309 386 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 IL1RNP18510 177 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 PAFAH1B1P43034 410 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 EEF1A2Q05639 463 aaKnown RBP16.14■□□□□ 0.17
BRCC3-202ENST00000340647 C2orf54Q08AI8 447 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 C18orf21Q32NC0 220 aaPredicted RBP16.14■□□□□ 0.17
BRCC3-202ENST00000340647 FAAH2Q6GMR7 532 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 ATCAYQ86WG3 371 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 C17orf64Q86WR6 236 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 ZBED8Q8IZ13 594 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 FAM26EQ8N5C1 309 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 MFSD9Q8NBP5 474 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 NEIL2Q969S2 332 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 THAP11Q96EK4 314 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 IMMP1LQ96LU5 166 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 DPH5Q9H2P9 285 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 ARL15Q9NXU5 204 aa16.14■□□□□ 0.17
BRCC3-202ENST00000340647 UTP6Q9NYH9 597 aaKnown RBP16.14■□□□□ 0.17
BRCC3-202ENST00000340647 G3BP2Q9UN86 482 aaKnown RBP16.14■□□□□ 0.17
BRCC3-202ENST00000340647 H0YIG0 161 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 SGK494L7N484 410 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 TXNDC9O14530 226 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 CBX6O95503 412 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 GUCA1CO95843 209 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 B3GALT4O96024 378 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 PRR35P0CG20 571 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 SOX11P35716 441 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 GMPRP36959 345 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 AP1S2P56377 157 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 GPX6P59796 221 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 CAPN13Q6MZZ7 669 aaPredicted RBP16.13■□□□□ 0.17
BRCC3-202ENST00000340647 NDUFAF7Q7L592 441 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 AFAP1L2Q8N4X5 818 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 CATSPER1Q8NEC5 780 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 WDR77Q9BQA1 342 aaPredicted RBP16.13■□□□□ 0.17
BRCC3-202ENST00000340647 VN1R1Q9GZP7 353 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 WHRNQ9P202 907 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 ZFATQ9P243 1243 aa16.13■□□□□ 0.17
BRCC3-202ENST00000340647 NOVA2Q9UNW9 492 aaKnown RBP16.13■□□□□ 0.17
BRCC3-202ENST00000340647 MTO1Q9Y2Z2 717 aaKnown RBP16.13■□□□□ 0.17
BRCC3-202ENST00000340647 SPTBN1Q01082 2364 aaKnown RBP16.13■□□□□ 0.17
BRCC3-202ENST00000340647 NOTCH2Q04721 2471 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 BLACEA4D250 179 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 NPEPPSL1A6NEC2 478 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms