RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PRAMEF14Q5SWL7 426 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 PRAMEF13Q5VWM6 474 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ATG9BQ674R7 924 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TBPL2Q6SJ96 375 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF621Q6ZSS3 439 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 COMMD6Q7Z4G1 85 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 FAM129CQ86XR2 697 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 DCUN1D3Q8IWE4 304 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CHCHD4Q8N4Q1 142 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 OXR1Q8N573 874 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 AMER3Q8N944 861 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 GLB1L3Q8NCI6 653 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF548Q8NEK5 533 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 OR2T12Q8NG77 320 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 FBXO30Q8TB52 745 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 NETO1Q8TDF5 533 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CIDECQ96AQ7 238 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 DMRT3Q9NQL9 472 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ITM2CQ9NQX7 267 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 SH3BP4Q9P0V3 963 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 C5AR2Q9P296 337 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 INVSQ9Y283 1065 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 DGKBQ9Y6T7 804 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TDRD6O60522 2096 aaKnown RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TCRBV21S2A2A0A5A6 115 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 PDZK1P1A8MUH7 402 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 RFXANKO14593 260 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 NPPAP01160 153 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 NTRK1P04629 796 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 NUDT7P0C024 238 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC35G4P0C7Q5 338 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 GABRG2P18507 467 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 GRSF1Q12849 480 aaKnown RBP eCLIP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 BNIP2Q12982 314 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CSTF3Q12996 717 aaKnown RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CCINQ13939 588 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 AGERQ15109 404 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 MPEG1Q2M385 716 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF542PQ5EBM4 170 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ANKRD34AQ69YU3 496 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 ENPP7Q6UWV6 458 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TMIGD1Q6UXZ0 262 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 KLHDC8AQ8IYD2 350 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 FAM160A2Q8N612 972 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 OR1E3Q8WZA6 343 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TESCQ96BS2 214 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 FCRL1Q96LA6 429 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CNBD2Q96M20 576 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 PANX1Q96RD7 426 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 F2RL3Q96RI0 385 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 CHID1Q9BWS9 393 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TMEM168Q9H0V1 697 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 SOX17Q9H6I2 414 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 PHPT1Q9NRX4 125 aaPredicted RBP7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 LMCD1Q9NZU5 365 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 TBC1D29Q9UFV1 150 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 OAZ3Q9UMX2 235 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC17A4Q9Y2C5 497 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 AP4B1Q9Y6B7 739 aa7.11□□□□□ -1.27
SRFBP1-201ENST00000339397 SERTM1A2A2V5 107 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 DYTNA2CJ06 578 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 AQP12BA6NM10 295 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 DLGAP1O14490 977 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 PI15O43692 258 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 PCDH7O60245 1069 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 CLIC3O95833 236 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 LYNP07948 512 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 PRPS1L1P21108 318 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 IDSP22304 550 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 KELP23276 732 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 PSMA4P25789 261 aaKnown RBP7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 GZMMP51124 257 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 SNRPNP63162 240 aaKnown RBP7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 PCDH1Q08174 1060 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 FXNQ16595 210 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 CMPK2Q5EBM0 449 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC30A9Q6PML9 568 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 UNC5DQ6UXZ4 953 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF852Q6ZMS4 543 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 ERMP1Q7Z2K6 904 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 DGLUCYQ7Z3D6 616 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 AQP12AQ8IXF9 295 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 LAS2Q8IYD9 372 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 CBR4Q8N4T8 237 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 TRPV3Q8NET8 790 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 RLN3Q8WXF3 142 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 MAL2Q969L2 176 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 FAM131CQ96AQ9 280 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 DUS3LQ96G46 650 aaKnown RBP7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 AGPAT4Q9NRZ5 378 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 ARMC1Q9NVT9 282 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 SPHK1Q9NYA1 384 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 ADGRE2Q9UHX3 823 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 RUVBL1Q9Y265 456 aaKnown RBP7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 TMED5Q9Y3A6 229 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 PCDHB3Q9Y5E6 796 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 SCN3AQ9NY46 2000 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 NPIPB8E9PQR5 432 aa7.1□□□□□ -1.27
SRFBP1-201ENST00000339397 FPGTO14772 594 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms