RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 C8GP07360 202 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 HIST1H2AGP0C0S8 130 aaPredicted RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 HIST1H2ADP20671 130 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 GRK3P35626 688 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 SOX11P35716 441 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 MAGEA3P43357 314 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 TNFSF10P50591 281 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 AP2B1P63010 937 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 NAE1Q13564 534 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 CRYMQ14894 314 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 PCOLCEQ15113 449 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 AGTRAPQ6RW13 159 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 RIPOR1Q6ZS17 1223 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 C17orf64Q86WR6 236 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 SLC35F6Q8N357 371 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 HAS2Q92819 552 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 HIST1H2AHQ96KK5 128 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 OSBPL9Q96SU4 736 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 HIST1H2AJQ99878 128 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 H2AFJQ9BTM1 129 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 TUBB6Q9BUF5 446 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 PCBD2Q9H0N5 130 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 STMN3Q9NZ72 180 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 H0YIG0 161 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 SGK494L7N484 410 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 EIF3FO00303 357 aaPredicted RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 WDPCPO95876 746 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 XCR1P46094 333 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 FNTAP49354 379 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 SNRPNP63162 240 aaKnown RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 DHX9Q08211 1270 aaKnown RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 RNASEH2BQ5TBB1 312 aaKnown RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 HIBCHQ6NVY1 386 aaPredicted RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 RPUSD3Q6P087 351 aaKnown RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 PAQR3Q6TCH7 311 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 FJX1Q86VR8 437 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 ARHGEF39Q8N4T4 335 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 CAMKVQ8NCB2 501 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 C2CD4AQ8NCU7 369 aaPredicted RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 OR51Q1Q8NH59 317 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 LINGO1Q96FE5 620 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 VN1R1Q9GZP7 353 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 PARVBQ9HBI1 364 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 ANKHQ9HCJ1 492 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 C19orf25Q9UFG5 118 aaPredicted RBP18.4■□□□□ 0.54
ITGA4-202ENST00000339307 TEKT2Q9UIF3 430 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 SH2B3Q9UQQ2 575 aa18.4■□□□□ 0.54
ITGA4-202ENST00000339307 LOC102723996A0A087X1L8 192 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 OR2W5A6NFC9 320 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 NSA2O95478 260 aaKnown RBP18.39■□□□□ 0.53
ITGA4-202ENST00000339307 SERPIND1P05546 499 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 MYBL2P10244 700 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 CDH1P12830 882 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 KCNK10P57789 538 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 CSNK1G2P78368 415 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 SRSF11Q05519 484 aaKnown RBP18.39■□□□□ 0.53
ITGA4-202ENST00000339307 BTBD16Q32M84 506 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 BBS9Q3SYG4 887 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 HP1BP3Q5SSJ5 553 aaPredicted RBP18.39■□□□□ 0.53
ITGA4-202ENST00000339307 TMEM205Q6UW68 189 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 LANCL3Q6ZV70 420 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 VN1R4Q7Z5H5 301 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 CPEB2Q7Z5Q1 589 aaKnown RBP18.39■□□□□ 0.53
ITGA4-202ENST00000339307 ASPGQ86U10 573 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 GPATCH11Q8N954 259 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 KCT2Q8NC54 265 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 ACTRT1Q8TDG2 376 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 SLC13A3Q8WWT9 602 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 CYTH2Q99418 400 aa18.39■□□□□ 0.53
ITGA4-202ENST00000339307 NBPF19A0A087WUL8 3843 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 KCNE1BA0A087WTH5 132 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 BCL6P41182 706 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 CDKN2DP55273 166 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 PDAP1Q13442 181 aaKnown RBP18.38■□□□□ 0.53
ITGA4-202ENST00000339307 SPANXN3Q5MJ09 141 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 RBM20Q5T481 1227 aaKnown RBP18.38■□□□□ 0.53
ITGA4-202ENST00000339307 C1QL3Q5VWW1 255 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 CAPN13Q6MZZ7 669 aaPredicted RBP18.38■□□□□ 0.53
ITGA4-202ENST00000339307 GFRALQ6UXV0 394 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 SLC26A11Q86WA9 606 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 SHISA5Q8N114 240 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 THAP11Q96EK4 314 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 TAAR6Q96RI8 345 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 SLX1AQ9BQ83 275 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 RBCK1Q9BYM8 510 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 ARL15Q9NXU5 204 aa18.38■□□□□ 0.53
ITGA4-202ENST00000339307 A0A1B0GUH1 482 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 A0A1W2PQ72 361 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 LCMT2O60294 686 aaKnown RBP18.37■□□□□ 0.53
ITGA4-202ENST00000339307 ZG16O60844 167 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 RDH16O75452 317 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 CDC123O75794 336 aaPredicted RBP18.37■□□□□ 0.53
ITGA4-202ENST00000339307 RASAL1O95294 804 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 TTC4O95801 387 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 SLC35G6P0C7Q6 338 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 CCND1P24385 295 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 EFNA3P52797 238 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 IL2P60568 153 aa18.37■□□□□ 0.53
ITGA4-202ENST00000339307 TIAL1Q01085 375 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITGA4-202ENST00000339307 MEF2AQ02078 507 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms