RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 C6orf62Q9GZU0 229 aaPredicted RBP18.18■□□□□ 0.5
PSPC1-201ENST00000338910 REV3LO60673 3130 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 TRBV5-4A0A0C4DH59 114 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 HAT1O14929 419 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 HOXC11O43248 304 aaPredicted RBP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 SCO2O43819 266 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 FGF19O95750 216 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 CA3P07451 260 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 RPS3P23396 243 aaKnown RBP eCLIP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 GGT5P36269 586 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 ARPC4P59998 168 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 ZNF45Q02386 682 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 AP5B1Q2VPB7 878 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 CARD16Q5EG05 197 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 LY6G5CQ5SRR4 150 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 AGAP6Q5VW22 663 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 SBSNQ6UWP8 590 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 TPRG1Q6ZUI0 275 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 NCLNQ969V3 563 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 AGAP4Q96P64 663 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 NXF2Q9GZY0 626 aaKnown RBP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 GMPPBQ9Y5P6 360 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 XIRP2A4UGR9 3374 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 UNC80Q8N2C7 3258 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 FAM20BO75063 409 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 POP4O95707 220 aaKnown RBP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 SERPINA1P01009 418 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 CAPN1P07384 714 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 LHCGRP22888 699 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 WEE1P30291 646 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 LIPAP38571 399 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 MAGEA2P43356 314 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 DAPP51397 102 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 PRKCDQ05655 676 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 MAD2L1BPQ15013 274 aaPredicted RBP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 TPRG1LQ5T0D9 272 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 KDM4DQ6B0I6 523 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 ADGRG2Q8IZP9 1017 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 NXPE1Q8N323 547 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 PARP16Q8N5Y8 322 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 METTL6Q8TCB7 284 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 NETO1Q8TDF5 533 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 APOL4Q9BPW4 351 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 ITPAQ9BY32 194 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 MTIF3Q9H2K0 278 aaKnown RBP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 SPHK2Q9NRA0 654 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 NDRG4Q9ULP0 352 aaKnown RBP18.17■□□□□ 0.5
PSPC1-201ENST00000338910 N6AMT1Q9Y5N5 214 aa18.17■□□□□ 0.5
PSPC1-201ENST00000338910 AIREO43918 545 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 KRT8P05787 483 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 EFNA1P20827 205 aaPredicted RBP18.16■□□□□ 0.5
PSPC1-201ENST00000338910 HOXA9P31269 272 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 AKT1P31749 480 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 KRT20P35900 424 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 LAPTM4AQ15012 233 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 MAPKAPK3Q16644 382 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 RUNDC3AQ59EK9 446 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 PRSS36Q5K4E3 855 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 USP45Q70EL2 814 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 CEP68Q76N32 757 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 RTL10Q7L3V2 364 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 CELF2-AS1Q8N7Q2 184 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 OR6F1Q8NGZ6 308 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 ECHDC3Q96DC8 303 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 APOL5Q9BWW9 433 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 NSUN3Q9H649 340 aaKnown RBP18.16■□□□□ 0.5
PSPC1-201ENST00000338910 WNT6Q9Y6F9 365 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 SZT2Q5T011 3432 aa18.16■□□□□ 0.5
PSPC1-201ENST00000338910 TNFRSF10AO00220 468 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 FFAR2O15552 330 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 RECQL5O94762 991 aaPredicted RBP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 HOXB6P17509 224 aaKnown RBP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 KRR1Q13601 381 aaKnown RBP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 PTGR1Q14914 329 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 SYT16Q17RD7 645 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 FAM174BQ3ZCQ3 159 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 GPR33Q49SQ1 333 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 C9orf50Q5SZB4 431 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 ADAMTSL2Q86TH1 951 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 ADIPOR2Q86V24 386 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 CBARPQ8N350 705 aaPredicted RBP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 TBC1D20Q96BZ9 403 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 PYURFQ96I23 114 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 SNX18Q96RF0 628 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 LYSMD1Q96S90 227 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 SH3GL1Q99961 368 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 CDADC1Q9BWV3 514 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 BRD9Q9H8M2 597 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 NUDT4Q9NZJ9 180 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 DSCR3O14972 297 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 HNRNPA1P09651 372 aaKnown RBP eCLIP18.15■□□□□ 0.5
PSPC1-201ENST00000338910 RGS4P49798 205 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 ATP13A5Q4VNC0 1218 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 TMEM215Q68D42 235 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 GCNT7Q6ZNI0 430 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 PLPP6Q8IY26 295 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 PHACTR4Q8IZ21 702 aa18.15■□□□□ 0.5
PSPC1-201ENST00000338910 OR10Q1Q8NGQ4 319 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms