RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 KMT2EQ8IZD2 1858 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TTC28Q96AY4 2481 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TRBC2A0A5B9 178 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 FAM86C2PA6NEL3 165 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 OR5K3A6NET4 321 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PATE3B3GLJ2 98 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SAP18O00422 153 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 NR5A2O00482 541 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 AIM2O14862 343 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 GYG2O15488 501 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SLC22A3O75751 556 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 HRH2P25021 359 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ACSM2AQ08AH3 577 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TBL3Q12788 808 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PTGR1Q14914 329 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 C6orf132Q5T0Z8 1188 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ACSM2BQ68CK6 577 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ZNF425Q6IV72 752 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 OOSP2Q86WS3 158 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 C1orf52Q8N6N3 182 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 KYQ8NBH2 561 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 RSC1A1Q92681 617 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 RCN3Q96D15 328 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SERPINI1Q99574 410 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SLC38A3Q99624 504 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 RTKNQ9BST9 563 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 EBPLQ9BY08 206 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ACTL8Q9H568 366 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 NMRK1Q9NWW6 199 aa14.14□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ANKRD28O15084 1053 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TBX6O95947 436 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 GIMD1P0DJR0 217 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 MAGP20916 626 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TACR1P25103 407 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PTX3P26022 381 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 MAPK1P28482 360 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 IL12AP29459 219 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 BCL6P41182 706 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ZFP36L2P47974 494 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 CORO7P57737 925 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PPP1CAP62136 330 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 KCNJ2P63252 427 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SLC25A3Q00325 362 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 HLA-BQ31612 363 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 NOXRED1Q6NXP6 359 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SPESP1Q6UW49 350 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 RIPOR1Q6ZS17 1223 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ZNF438Q7Z4V0 828 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PAQR7Q86WK9 346 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PARP9Q8IXQ6 854 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 CLHC1Q8NHS4 586 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 NUDT8Q8WV74 236 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 CHTF18Q8WVB6 975 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 FCRL1Q96LA6 429 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PPM1MQ96MI6 270 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 NPAS2Q99743 824 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SLC25A23Q9BV35 468 aa14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 RUVBL1Q9Y265 456 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-201ENST00000338399 A0A1B0GTQ1 180 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ZW10O43264 779 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 MYO1DO94832 1006 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 UBXN7O94888 489 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SERPIND1P05546 499 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PRPS2P11908 318 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SDC1P18827 310 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 EPHA8P29322 1005 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 CPOXP36551 454 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 LSSP48449 732 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 NUDT2P50583 147 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 POLR2JP52435 117 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 STX5Q13190 355 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 MMEL1Q495T6 779 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 VPS26BQ4G0F5 336 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SPIN4Q56A73 249 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ARMC6Q6NXE6 501 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 BLOC1S3Q6QNY0 202 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 GATAD2AQ86YP4 633 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TBC1D19Q8N5T2 526 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 C11orf24Q96F05 449 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 METTL2AQ96IZ6 378 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 TSSK3Q96PN8 268 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 MS4A8Q9BY19 250 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 DPY30Q9C005 99 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 KLHL25Q9H0H3 589 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 UCK1Q9HA47 277 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 IL21RQ9HBE5 538 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PPT2Q9UMR5 302 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 PCDHGA2Q9Y5H1 932 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 ARID1BQ8NFD5 2236 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 FAM234BA2RU67 622 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 LILRA5A6NI73 299 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 FBP2O00757 339 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 STATHP02808 62 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 CAPN3P20807 821 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 SERPINB1P30740 379 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 HOXD12P35452 270 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 KCNK10P57789 538 aa14.12□□□□□ -0.15
CDK5RAP3-201ENST00000338399 RAE1P78406 368 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms