RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 WDR48Q8TAF3 677 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 CLP1Q92989 425 aaKnown RBP14.32□□□□□ -0.12
UBA1-201ENST00000335972 YTHDF1Q9BYJ9 559 aaKnown RBP14.32□□□□□ -0.12
UBA1-201ENST00000335972 CDH7Q9ULB5 785 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 SAMD4AQ9UPU9 718 aaKnown RBP14.32□□□□□ -0.12
UBA1-201ENST00000335972 EYSQ5T1H1 3165 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 BOLA2-SMG1P6H3BVE0 249 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 ADH1AP07327 375 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 MPC1LP0DKB6 136 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 EPCAMP16422 314 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 VBP1P61758 197 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 LRRC26Q2I0M4 334 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 TBC1D25Q3MII6 688 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 VN1R2Q8NFZ6 395 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 OR4A15Q8NGL6 344 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 CSGALNACT1Q8TDX6 532 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 RPL3LQ92901 407 aaKnown RBP14.32□□□□□ -0.12
UBA1-201ENST00000335972 PLEKHA8Q96JA3 519 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 IL1RAPQ9NPH3 570 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 KRT84Q9NSB2 600 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 USE1Q9NZ43 259 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 SELENONQ9NZV5 590 aa14.32□□□□□ -0.12
UBA1-201ENST00000335972 ATG2BQ96BY7 2078 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 MT-ND2P03891 347 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 CLTBP09497 229 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 SMU1Q2TAY7 513 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 GGTA1PQ4G0N0 100 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 TMEM236Q5W0B7 351 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 SHQ1Q6PI26 577 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 SLC16A12Q6ZSM3 486 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 AHSA2Q719I0 299 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 PARS2Q7L3T8 475 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 TRMT11Q7Z4G4 463 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 CCDC71Q8IV32 467 aaPredicted RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 ZNF540Q8NDQ6 660 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 NDNFQ8TB73 568 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 BTN2A2Q8WVV5 523 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 MRGPRX3Q96LB0 322 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 THUMPD1Q9NXG2 353 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 CXXC1Q9P0U4 656 aaPredicted RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 GULP1Q9UBP9 304 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 PSME2Q9UL46 239 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 MAP4K5Q9Y4K4 846 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 CCDC88CQ9P219 2028 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 CYP2A6P11509 494 aaPredicted RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 VIPR2P41587 438 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 AP1S2P56377 157 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 PHEXP78562 749 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 HENMT1Q5T8I9 393 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 DHRS4L2Q6PKH6 230 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 SMYD1Q8NB12 490 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 GLYATL1Q969I3 302 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 RAD21L1Q9H4I0 556 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■□□□□ 8.9
UBA1-201ENST00000335972 SPASTQ9UBP0 616 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 IL36AQ9UHA7 158 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 PCYT1BQ9Y5K3 369 aaPredicted RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 ABHD14A-ACY1A0A1B0GW23 586 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 NDUFS2O75306 463 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 SLCO2B1O94956 709 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 C6orf47O95873 294 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 GSTM1P09488 218 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 RRM2P31350 389 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 TTKP33981 857 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 IRS1P35568 1242 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 NUDT6P53370 316 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 CYP4F2P78329 520 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 GSTM4Q03013 218 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 CREMQ03060 361 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 NR1D2Q14995 579 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 CCDC149Q6ZUS6 474 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 METTL3Q86U44 580 aaKnown RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 SLC44A2Q8IWA5 706 aaPredicted RBP14.31□□□□□ -0.12
UBA1-201ENST00000335972 ZNF480Q8WV37 535 aa14.31□□□□□ -0.12
UBA1-201ENST00000335972 SH3PXD2BA1X283 911 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 FAM20BO75063 409 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 MYO1DO94832 1006 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 CATP04040 527 aaKnown RBP14.3□□□□□ -0.12
UBA1-201ENST00000335972 HOXA9P31269 272 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 OPRL1P41146 370 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 ARHGDIAP52565 204 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 TBPL1P62380 186 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 SLBPQ14493 270 aaKnown RBP eCLIP14.3□□□□□ -0.12
UBA1-201ENST00000335972 PERM1Q5SV97 790 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 BRAT1Q6PJG6 821 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 FAR1Q8WVX9 515 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 GLMNQ92990 594 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 REEP1Q9H902 201 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 TBC1D23Q9NUY8 699 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 RLIMQ9NVW2 624 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 RHCGQ9UBD6 479 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 EXO1Q9UQ84 846 aaKnown RBP14.3□□□□□ -0.12
UBA1-201ENST00000335972 TMEM98Q9Y2Y6 226 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 H3BM21 787 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 J3KTA2 159 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 SCAMP2O15127 329 aaKnown RBP14.3□□□□□ -0.12
UBA1-201ENST00000335972 ATG13O75143 517 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 STATHP02808 62 aa14.3□□□□□ -0.12
UBA1-201ENST00000335972 LCKP06239 509 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms