RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GAD2Q05329 585 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 PTPN11Q06124 597 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ST3GAL4Q11206 333 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 FASTKD3Q14CZ7 662 aaKnown RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SEC23BQ15437 767 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM35AQ86V20 835 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GTPBP8Q8N3Z3 284 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC38A4Q969I6 547 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 OR10A4Q9H209 315 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ENAMQ9NRM1 1142 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 NAV1Q8NEY1 1877 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 TEX13DA0A0J9YY54 714 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 LYPLA1O75608 230 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CDK1P06493 297 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 TYRP14679 529 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MAOAP21397 527 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 IL12BP29460 328 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MIPP30301 263 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CAP2P40123 477 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 RNF4P78317 190 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ATXN7L2Q5T6C5 722 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MEDAGQ5VYS4 303 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 IRF2BP2Q7Z5L9 587 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 RANBP3LQ86VV4 465 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC22A15Q8IZD6 547 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 HHLA1C9JL84 531 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 PRKXP51817 358 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 DBPQ10586 325 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF155Q12901 538 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 EPGNQ6UW88 154 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 CHSY3Q70JA7 882 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 CRYBG2Q8N1P7 616 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 DUSP16Q9BY84 665 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ZDHHC18Q9NUE0 388 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 RALGAPA1Q6GYQ0 2036 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 DAPL1A0PJW8 107 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SMSP52788 366 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 FBXO47Q5MNV8 452 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 C3orf67Q6ZVT6 689 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 NPLOC4Q8TAT6 608 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 MYRFLQ96LU7 910 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SULT4A1Q9BR01 284 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A1B0GVG6 124 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 RHOP08100 348 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ARSFP54793 590 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 COL13A1Q5TAT6 717 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 FIP1L1Q6UN15 594 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 BEST3Q8N1M1 668 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 GMCL1P1Q8NEA9 526 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF675Q8TD23 568 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 XAGE5Q8WWM1 108 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF641Q96N77 438 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ALPK1Q96QP1 1244 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 MCCC2Q9HCC0 563 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TRUB2O95900 331 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 CSTBP04080 98 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TPT1P13693 172 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ALDH3B1P43353 468 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 GNMTQ14749 295 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM46DQ8NEK8 389 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ADAMTS15Q8TE58 950 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 LINGO1Q96FE5 620 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 NDC1Q9BTX1 674 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TKTL2Q9H0I9 626 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 LRFN1Q9P244 771 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SPATA31A6Q5VVP1 1343 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 C2orf92A0A1B0GVN3 265 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 MEIOCA2RUB1 952 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 CLN5O75503 358 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 PDYNP01213 254 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 BCL2A1Q16548 175 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 LAS2Q8IYD9 372 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 RELTQ969Z4 430 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ACBD6Q9BR61 282 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TSPAN16Q9UKR8 245 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SH2B3Q9UQQ2 575 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC35F4A4IF30 521 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC34A2O95436 690 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 ATP4BP51164 291 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 OR12D2P58182 307 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TROAPQ12815 778 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 NTRK3Q16288 839 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 MXRA8Q9BRK3 442 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TMEM121BQ9BXQ6 578 aaPredicted RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TLE6Q9H808 572 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 KLHL21Q9UJP4 597 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 E7EQ34 232 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 OR7A17O14581 309 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 PSMD10O75832 226 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 MPSTP25325 297 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 SF3A2Q15428 464 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 TMPRSS11BQ86T26 416 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 MAGIXQ9H6Y5 334 aa10.07□□□□□ -0.8
SPTBN1-201ENST00000333896 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.07□□□□□ -0.81e-7■□□□□ 9.9
SPTBN1-201ENST00000333896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms