RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 OR56A3Q8NH54 315 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 FAM45AQ8TCE6 357 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 C8orf44Q96CB5 159 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 HIST1H2AHQ96KK5 128 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 NDNQ99608 321 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 HIST1H2AJQ99878 128 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 MESP1Q9BRJ9 268 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 HAUS8Q9BT25 410 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 H2AFJQ9BTM1 129 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 RNF32Q9H0A6 362 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 ZNF700Q9H0M5 742 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 PLAC1Q9HBJ0 212 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 PLEKHB1Q9UF11 243 aaPredicted RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 KLHL18O94889 574 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 LDLRP01130 860 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 ENO2P09104 434 aaPredicted RBP12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 GRK3P35626 688 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 IL2P60568 153 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 PCOLCEQ15113 449 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 BBS9Q3SYG4 887 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 CAPN13Q6MZZ7 669 aaPredicted RBP12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 HIBCHQ6NVY1 386 aaPredicted RBP12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 PLD3Q8IV08 490 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 IGDCC3Q8IVU1 814 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 OR4K1Q8NGD4 311 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 FAR1Q8WVX9 515 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 ATL1Q8WXF7 558 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 ANKRD7Q92527 254 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 HAS2Q92819 552 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 LINGO1Q96FE5 620 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 TUBB6Q9BUF5 446 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 SLC5A6Q9Y289 635 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 TEX264Q9Y6I9 313 aa12.86□□□□□ -0.35
GTF3C6-201ENST00000329970 DYTNA2CJ06 578 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 CCDC188H7C350 402 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 E2F3O00716 465 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 BANF1O75531 89 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 EDN3P14138 238 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 NPPBP16860 134 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 IL10P22301 178 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 BCL6P41182 706 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 EFNA3P52797 238 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 ILF2Q12905 390 aaKnown RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 NAE1Q13564 534 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 ELOAQ14241 798 aaKnown RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 PHKG1Q16816 387 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 SYT16Q17RD7 645 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 HECTD2Q5U5R9 776 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 NIPAL1Q6NVV3 410 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 STRA8Q7Z7C7 330 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 CREG2Q8IUH2 290 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 BRIX1Q8TDN6 353 aaKnown RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 GRHL3Q8TE85 626 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 IMMP1LQ96LU5 166 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 WDR83Q9BRX9 315 aaKnown RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 YIPF2Q9BWQ6 316 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 TRMT1Q9NXH9 659 aaKnown RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 C19orf25Q9UFG5 118 aaPredicted RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 ERRFI1Q9UJM3 462 aaPredicted RBP12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 MKL2Q9ULH7 1088 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 VWA7Q9Y334 891 aa12.85□□□□□ -0.35
GTF3C6-201ENST00000329970 TRAV17A0A0B4J275 112 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 E7ESA3 106 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 NDC80O14777 642 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 FFAR3O14843 346 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 GPR42O15529 346 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 SEC31AO94979 1220 aaKnown RBP12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 SLC35G6P0C7Q6 338 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 RNF224P0DH78 156 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 C8orf89P0DMQ9 161 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 ELK3P41970 407 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 AGTR2P50052 363 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 TNFSF10P50591 281 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 SNRPNP63162 240 aaKnown RBP12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 DR1Q01658 176 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 EEF1A2Q05639 463 aaKnown RBP12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 CDC16Q13042 620 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 ZXDCQ2QGD7 858 aaPredicted RBP12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 LINC00696Q6ZRV3 163 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 ASPGQ86U10 573 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 AFAP1L2Q8N4X5 818 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 MFSD9Q8NBP5 474 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 OR9A4Q8NGU2 314 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 OR51Q1Q8NH59 317 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 SLC13A3Q8WWT9 602 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 METTL21AQ8WXB1 218 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 CNDP1Q96KN2 507 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms