RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 HNF4AP41235 474 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 CTSKP43235 329 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-202ENST00000324340 C21orf59P57076 290 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 HNRNPKP61978 463 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX39A-202ENST00000324340 UBE2IP63279 158 aaKnown RBP12.29□□□□□ -0.44
DDX39A-202ENST00000324340 KRT33BQ14525 404 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 TCEA2Q15560 299 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF829Q3KNS6 432 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-202ENST00000324340 PRAMEF14Q5SWL7 426 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 PRAMEF13Q5VWM6 474 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 ATG9BQ674R7 924 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 GRHL2Q6ISB3 625 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SUSD1Q6UWL2 747 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 CHSY3Q70JA7 882 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 TRIM46Q7Z4K8 759 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 NAGSQ8N159 534 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 FBXW8Q8N3Y1 598 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 METTL25Q8N6Q8 603 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 NEIL2Q969S2 332 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 CXorf40BQ96DE9 158 aa12.29□□□□□ -0.44
DDX39A-202ENST00000324340 PRR11Q96HE9 360 aaPredicted RBP12.29□□□□□ -0.44
DDX39A-202ENST00000324340 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
DDX39A-202ENST00000324340 MUC3AQ02505 3323 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 PRAMEF33A0A0G2JMD5 474 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 GOLGA8QA0A0J9YX86 632 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 DYTNA2CJ06 578 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 GOLGA8OA6NCC3 632 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 CCDC160A6NGH7 325 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 TRIM64CA6NLI5 447 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 GOLGA8NF8WBI6 632 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 H0YIV9 168 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 MANBAO00462 879 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 TXNDC9O14530 226 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 PRICKLE3O43900 615 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-202ENST00000324340 BMP10O95393 424 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 KRT6AP02538 564 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 KRT6BP04259 564 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 SP9P0CG40 484 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 CD22P20273 847 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 ARL1P40616 181 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-202ENST00000324340 KRT6CP48668 564 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 TXNL4AP83876 142 aaKnown RBP12.28□□□□□ -0.44
DDX39A-202ENST00000324340 IRF8Q02556 426 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 KCNC4Q03721 635 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 C1orf61Q13536 156 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 DOC2AQ14183 400 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 INAQ16352 499 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 XKR6Q5GH73 641 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 TCHHL1Q5QJ38 904 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-202ENST00000324340 OGFOD2Q6N063 350 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 NIPAL1Q6NVV3 410 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 RNF111Q6ZNA4 994 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 GKN2Q86XP6 184 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 LMNTD1Q8N9Z9 388 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF548Q8NEK5 533 aaPredicted RBP12.28□□□□□ -0.44
DDX39A-202ENST00000324340 SLC5A11Q8WWX8 675 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 PPP1R36Q96LQ0 422 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 NRTNQ99748 197 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF385DQ9H6B1 395 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 INIPQ9NRY2 104 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 TMEM74BQ9NUR3 256 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 OR6C2Q9NZP2 312 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 CPNE7Q9UBL6 633 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 SNX6Q9UNH7 406 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 SH2B3Q9UQQ2 575 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 POMPQ9Y244 141 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 BTRCQ9Y297 605 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 DYRK1BQ9Y463 629 aa12.28□□□□□ -0.44
DDX39A-202ENST00000324340 A0A1B0GVT2 93 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 NPIPB8E9PQR5 432 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 LMO7DNF2Z398 122 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 AQP9O43315 295 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ULK1O75385 1050 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 LINC00032P0C843 101 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 C1GALT1C1LP0DN25 315 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 DPP6P42658 865 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 RXRGP48443 463 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 HTR6P50406 440 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 BNC1Q01954 994 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ABRAXAS2Q15018 415 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 CPSF6Q16630 551 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDX39A-202ENST00000324340 NDUFA5Q16718 116 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 GRAMD1BQ3KR37 738 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 C10orf62Q5T681 223 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-202ENST00000324340 IRAK1BP1Q5VVH5 260 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 LPCAT4Q643R3 524 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 NXPE4Q6UWF7 544 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 Q6ZSR9 355 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 AMIGO1Q86WK6 493 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 C17orf82Q86X59 251 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-202ENST00000324340 SYT12Q8IV01 421 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 DDIASQ8IXT1 998 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 SLC15A3Q8IY34 581 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 CPSF7Q8N684 471 aaKnown RBP12.27□□□□□ -0.45
DDX39A-202ENST00000324340 AVL9Q8NBF6 648 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms