RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LCKP06239 509 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 PGRP06401 933 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 OR56A5P0C7T3 313 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 MYCLP1P12525 358 aaPredicted RBP15.05■□□□□ -0
SHROOM1-201ENST00000319854 BCKDHAP12694 445 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 PRKCAP17252 672 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 TRPC1P48995 793 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 SLC7A9P82251 487 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 TOP3AQ13472 1001 aaPredicted RBP15.05■□□□□ -0
SHROOM1-201ENST00000319854 SIM2Q14190 667 aaPredicted RBP15.05■□□□□ -0
SHROOM1-201ENST00000319854 SYT6Q5T7P8 510 aaPredicted RBP15.05■□□□□ -0
SHROOM1-201ENST00000319854 CACHD1Q5VU97 1274 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 MACC1Q6ZN28 852 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 C10orf111Q8N326 155 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 ZNF583Q96ND8 569 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 RIOK2Q9BVS4 552 aaKnown RBP15.05■□□□□ -0
SHROOM1-201ENST00000319854 DNAJB9Q9UBS3 223 aa15.05■□□□□ -0
SHROOM1-201ENST00000319854 KNL1Q8NG31 2342 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 A8MV72 311 aaPredicted RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 LATS1O95835 1130 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GGT1P19440 569 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 MAPK8P45983 427 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 METAP1P53582 386 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GBX1Q14549 363 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GPR33Q49SQ1 333 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 ADNP2Q6IQ32 1131 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 PLD3Q8IV08 490 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 SYTL1Q8IYJ3 562 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 IL17RDQ8NFM7 739 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 OR2T12Q8NG77 320 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 UBE2FQ969M7 185 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 INPP5KQ9BT40 448 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 C6orf62Q9GZU0 229 aaPredicted RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 RC3H2Q9HBD1 1191 aaKnown RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 HEBP1Q9NRV9 189 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 TRBV5-4A0A0C4DH59 114 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 M0QX08 132 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 ANKRD28O15084 1053 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GRM6O15303 877 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 SCO2O43819 266 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 POP4O95707 220 aaKnown RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 CCDC159P0C7I6 412 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 RPS3P23396 243 aaKnown RBP eCLIP15.04■□□□□ -03e-7■■■■■ 39.2
SHROOM1-201ENST00000319854 SPINT3P49223 89 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 SLC35A2P78381 396 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 CCSMST1Q4G0I0 132 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 NEK5Q6P3R8 708 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GDPD4Q6W3E5 623 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 RFPL4BQ6ZWI9 263 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GATAD2AQ86YP4 633 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 SVOPQ8N4V2 548 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 OR2A12Q8NGT7 310 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 VOPP1Q96AW1 172 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 ZHX1-C8orf76Q96EF9 292 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 RDH12Q96NR8 316 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 TDP1Q9NUW8 608 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 COL4A6Q14031 1691 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 SPTBN5Q9NRC6 3674 aaKnown RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 ISPDA4D126 451 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 TAF4O00268 1085 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 BCKDKO14874 412 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 LILRB3O75022 631 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 EPORP19235 508 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 TGFBR2P37173 567 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 DCTP40126 519 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 CLK3P49761 638 aaKnown RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 MESP2Q0VG99 397 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 SYT16Q17RD7 645 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 FAM162AQ96A26 154 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 TOX2Q96NM4 488 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 RBM4BQ9BQ04 359 aaKnown RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 RBM4Q9BWF3 364 aaKnown RBP15.04■□□□□ -0
SHROOM1-201ENST00000319854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.04■□□□□ -0
SHROOM1-201ENST00000319854 ADGRE2Q9UHX3 823 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 VPS4AQ9UN37 437 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 CCL27Q9Y4X3 112 aa15.04■□□□□ -0
SHROOM1-201ENST00000319854 AGAP5A6NIR3 686 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 IFRD1O00458 451 aaPredicted RBP15.03■□□□□ -0
SHROOM1-201ENST00000319854 KPNA3O00505 521 aaPredicted RBP15.03■□□□□ -0
SHROOM1-201ENST00000319854 CD36P16671 472 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 GRK3P35626 688 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 PPM1AP35813 382 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 CASP9P55211 416 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 IL1RL1Q01638 556 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 OR6F1Q8NGZ6 308 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 TSPEARQ8WU66 669 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 GTF2H4Q92759 462 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 IRF7Q92985 503 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 APIPQ96GX9 242 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 DCSTAMPQ9H295 470 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 DUSP21Q9H596 190 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 PLSCR3Q9NRY6 295 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 SLC25A37Q9NYZ2 338 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 USE1Q9NZ43 259 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 VCANP13611 3396 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 PCM1Q15154 2024 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 ANTXRLA6NF34 631 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 EFCAB9A8MZ26 197 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms