RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CASP3P42574 277 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 KRR1Q13601 381 aaKnown RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 NDUFA5Q16718 116 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 TOR1AIP1Q5JTV8 583 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 DESI1Q6ICB0 168 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 PRSS55Q6UWB4 352 aaPredicted RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 TAS1R1Q7RTX1 841 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 METTL4Q8N3J2 472 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 TTPALQ9BTX7 342 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 EHD1Q9H4M9 534 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 TRPM5Q9NZQ8 1165 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 AFF4Q9UHB7 1163 aaKnown RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 GFRA2O00451 464 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 SMAD6O43541 496 aaKnown RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 NUDT7P0C024 238 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 HIST1H2AGP0C0S8 130 aaPredicted RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 MPC1LP0DKB6 136 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 HIST1H2ADP20671 130 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 GTF2E2P29084 291 aaKnown RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 MAPK8P45983 427 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 TUFMP49411 452 aaKnown RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 HJURPQ8NCD3 748 aaPredicted RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 OR4C15Q8NGM1 316 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 WFDC5Q8TCV5 224 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 HIST1H2AHQ96KK5 128 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 CASD1Q96PB1 797 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 FEVQ99581 238 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 HIST1H2AJQ99878 128 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 H2AFJQ9BTM1 129 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 SIAEQ9HAT2 523 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 TMEM184CQ9NVA4 438 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 QPCTLQ9NXS2 382 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 BTNL2Q9UIR0 455 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 FZD4Q9ULV1 537 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 CORO2BQ9UQ03 480 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 SLC22A14Q9Y267 594 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 PEX16Q9Y5Y5 336 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 IGLV3-16A0A075B6K0 115 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 SLC16A5O15375 505 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 TLL1O43897 1013 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 AOC2O75106 756 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 LATS1O95835 1130 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 LAMP1P11279 417 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 PPIBP23284 216 aaKnown RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 SP140Q13342 867 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 EIF4HQ15056 248 aaKnown RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 TSPAN33Q86UF1 283 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 SLC7A5P1Q8MH63 180 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 RNF175Q8N4F7 328 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 DENND6BQ8NEG7 585 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 FBXO22Q8NEZ5 403 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 C11orf24Q96F05 449 aaPredicted RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 COPS8Q99627 209 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 RUBCNLQ9H714 662 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 PRDM8Q9NQV8 689 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 ZNF226Q9NYT6 803 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 NDUFAF4Q9P032 175 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 HCSTQ9UBK5 93 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 RAPGEFL1Q9UHV5 662 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 RUVBL1Q9Y265 456 aaKnown RBP18.44■□□□□ 0.54
RTN4-201ENST00000317610 BTBD3Q9Y2F9 522 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 KLK4Q9Y5K2 254 aa18.44■□□□□ 0.54
RTN4-201ENST00000317610 ANAPC1Q9H1A4 1944 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 TNFRSF11BO00300 401 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 ADAMDEC1O15204 470 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 GCM2O75603 506 aaPredicted RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 MED26O95402 600 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 PTX3P26022 381 aaPredicted RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 UGT2B15P54855 530 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 IFITM2Q01629 132 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 CHIT1Q13231 466 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.54
RTN4-201ENST00000317610 SF3B4Q15427 424 aaKnown RBP eCLIP18.43■□□□□ 0.549e-8■■■□□ 17.1
RTN4-201ENST00000317610 CRELD1Q96HD1 420 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 DUSP26Q9BV47 211 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 OR51E2Q9H255 320 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 ELAC1Q9H777 363 aaKnown RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 SPATA6Q9NWH7 488 aaPredicted RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 MKLN1Q9UL63 735 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 C2orf78A6NCI8 922 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 MANSC4A6NHS7 340 aaPredicted RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 A8MU76 341 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 GFYI3L273 518 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 SCAMP2O15127 329 aaKnown RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 UGDHO60701 494 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 GKP32189 559 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 RGS6P49758 472 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 OLR1P78380 273 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 RGNQ15493 299 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 LIPJQ5W064 366 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 SLC8B1Q6J4K2 584 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 GDPD3Q7L5L3 318 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 CAMKMTQ7Z624 323 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 SLC5A8Q8N695 610 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 OR10G2Q8NGC3 310 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 WDR20Q8TBZ3 569 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 CHTF18Q8WVB6 975 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 SH3KBP1Q96B97 665 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 METTL2AQ96IZ6 378 aaKnown RBP18.43■□□□□ 0.54
RTN4-201ENST00000317610 AMBNQ9NP70 447 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms