RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 AREGP15514 252 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 NQO2P16083 231 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CRABP1P29762 137 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CD6P30203 668 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 RPS5P46782 204 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CLCN4P51793 760 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PCGF3Q3KNV8 242 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 RFTN2Q52LD8 501 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PIGGQ5H8A4 983 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 HECTD2Q5U5R9 776 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TMEM214Q6NUQ4 689 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 C16orf46Q6P387 395 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ZNF561Q8N587 486 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 RAB39BQ96DA2 213 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ANAPC16Q96DE5 110 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 DHRS9Q9BPW9 319 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ANKRD19PQ9H560 264 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 MKS1Q9NXB0 559 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 MAN2B2Q9Y2E5 1009 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 RAI2Q9Y5P3 530 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TLR4O00206 839 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 EIF2DP41214 584 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ART1P52961 327 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 AGERQ15109 404 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TP53I3Q53FA7 332 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ABI3BPQ7Z7G0 1075 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 FAM13CQ8NE31 585 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PLPP5Q8NEB5 264 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 IRGQQ8WZA9 623 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ZSWIM1Q9BR11 485 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 IL21RQ9HBE5 538 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CENPMQ9NSP4 180 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PLK2Q9NYY3 685 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PADI3Q9ULW8 664 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 C19orf67A6NJJ6 358 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 BET1O15155 118 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ASGR2P07307 311 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 JMJD7P0C870 316 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 C6P13671 934 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 UGT1A1P22309 533 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 KRTDAPP60985 99 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 FADDQ13158 208 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 OR2G6Q5TZ20 316 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CBR4Q8N4T8 237 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CHURC1Q8WUH1 139 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 POM121Q96HA1 1249 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 FAM46AQ96IP4 442 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 MCEEQ96PE7 176 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 LENG8Q96PV6 779 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TM9SF2Q99805 663 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 MUC13Q9H3R2 512 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PARD6AQ9NPB6 346 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 NUFIP1Q9UHK0 495 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PCDHGB1Q9Y5G3 927 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ZNF860A6NHJ4 632 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 DLGAP1O14490 977 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 IL1BP01584 269 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PFKMP08237 780 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ITGA6P23229 1130 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 AQP1P29972 269 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TLX1P31314 330 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 CCR1P32246 355 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 DSC2Q02487 901 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TOB2Q14106 344 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 GAB4Q2WGN9 574 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 VWA5B1Q5TIE3 1220 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 C15orf52Q6ZUT6 534 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ZNF34Q8IZ26 560 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TXNDC5Q8NBS9 432 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ZDHHC1Q8WTX9 485 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 FAHD2AQ96GK7 314 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 LRIG1Q96JA1 1093 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 G6PC3Q9BUM1 346 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ADGRE3Q9BY15 652 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ATG5Q9H1Y0 275 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TP63Q9H3D4 680 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 HRH4Q9H3N8 390 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 METTL17Q9H7H0 456 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 NTN4Q9HB63 628 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 SEMA4BQ9NPR2 832 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 PXMP2Q9NR77 195 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 TMEM216Q9P0N5 145 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 HACL1Q9UJ83 578 aa7.44□□□□□ -1.22
LIMCH1-201ENST00000313860 ESR1P03372 595 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 RFX2P48378 723 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 PSMD8P48556 350 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 MASP1P48740 699 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 MNX1P50219 401 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 FSTL1Q12841 308 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 SNTB2Q13425 540 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 SLC17A1Q14916 467 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 SLC22A10Q63ZE4 541 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 ZCCHC23Q6ZST2 131 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 MFSD2AQ8NA29 543 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 C16orf78Q8WTQ4 265 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 FCRL3Q96P31 734 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 CPNE1Q99829 537 aa7.43□□□□□ -1.22
LIMCH1-201ENST00000313860 MEPEQ9NQ76 525 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms