RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 PRSS41Q7RTY9 318 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 CREG2Q8IUH2 290 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 ANKMY2Q8IV38 441 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 FAM45AQ8TCE6 357 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 BRIX1Q8TDN6 353 aaKnown RBP18.51■□□□□ 0.55
LIME1-201ENST00000309546 NAPGQ99747 312 aaPredicted RBP18.51■□□□□ 0.55
LIME1-201ENST00000309546 TGIF2Q9GZN2 237 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 ARL15Q9NXU5 204 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 PTGFRNQ9P2B2 879 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 SAR1BQ9Y6B6 198 aa18.51■□□□□ 0.55
LIME1-201ENST00000309546 CNTRLQ7Z7A1 2325 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 IGHV1-45A0A0A0MS14 117 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 ANKUB1A6NFN9 424 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 JRKO75564 520 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 TSPAN12O95859 305 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 CELA2AP08217 269 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 PRR35P0CG20 571 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 RNF224P0DH78 156 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 GRK3P35626 688 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 BCL6P41182 706 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 CRB2Q5IJ48 1285 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 CAPN13Q6MZZ7 669 aaPredicted RBP18.5■□□□□ 0.55
LIME1-201ENST00000309546 LCTLQ6UWM7 567 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 GALNT7Q86SF2 657 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 ASPGQ86U10 573 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 SIRT6Q8N6T7 355 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 CAMKVQ8NCB2 501 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 ANP32BQ92688 251 aaKnown RBP18.5■□□□□ 0.55
LIME1-201ENST00000309546 PYCR2Q96C36 320 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 SNF8Q96H20 258 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 OLFM1Q99784 485 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 SGPP1Q9BX95 441 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 TRIM54Q9BYV2 358 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 AGPAT4Q9NRZ5 378 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 RIC8BQ9NVN3 520 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 HCN3Q9P1Z3 774 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 TEX264Q9Y6I9 313 aa18.5■□□□□ 0.55
LIME1-201ENST00000309546 ICE1Q9Y2F5 2266 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 KCNE1BA0A087WTH5 132 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 H0YIG0 161 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 NSA2O95478 260 aaKnown RBP18.49■□□□□ 0.55
LIME1-201ENST00000309546 CBX6O95503 412 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 GUCA1CO95843 209 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 SAT1P21673 171 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 FDXRP22570 491 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 PAFAH1B1P43034 410 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 TSFMP43897 325 aaKnown RBP18.49■□□□□ 0.55
LIME1-201ENST00000309546 ARG2P78540 354 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 MEF2AQ02078 507 aaPredicted RBP18.49■□□□□ 0.55
LIME1-201ENST00000309546 TLR1Q15399 786 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 MINDY4Q4G0A6 757 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 LRRC39Q96DD0 335 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 THAP11Q96EK4 314 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 HAUS8Q9BT25 410 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 ZFATQ9P243 1243 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 CORO1CQ9ULV4 474 aaPredicted RBP18.49■□□□□ 0.55
LIME1-201ENST00000309546 VWA7Q9Y334 891 aa18.49■□□□□ 0.55
LIME1-201ENST00000309546 CPAMD8Q8IZJ3 1885 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 HIVEP3Q5T1R4 2406 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 EFCAB8A8MWE9 144 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 SGK494L7N484 410 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 SEC31AO94979 1220 aaKnown RBP18.48■□□□□ 0.55
LIME1-201ENST00000309546 BMP10O95393 424 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 SERPINA7P05543 415 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 C8orf89P0DMQ9 161 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 EFNA3P52797 238 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 PDIA2Q13087 525 aaKnown RBP18.48■□□□□ 0.55
LIME1-201ENST00000309546 PCOLCEQ15113 449 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 STEAP4Q687X5 459 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 HIST2H2BCQ6DN03 193 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 TMEM214Q6NUQ4 689 aaKnown RBP18.48■□□□□ 0.55
LIME1-201ENST00000309546 SLC26A11Q86WA9 606 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 SHISA5Q8N114 240 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 KCT2Q8NC54 265 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 CATSPER1Q8NEC5 780 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 SLC13A3Q8WWT9 602 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 METTL21AQ8WXB1 218 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 LMF1Q96S06 567 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 VN1R1Q9GZP7 353 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 ANKHQ9HCJ1 492 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 PYCARDQ9ULZ3 195 aa18.48■□□□□ 0.55
LIME1-201ENST00000309546 PRRC2CQ9Y520 2896 aaKnown RBP18.48■□□□□ 0.55
LIME1-201ENST00000309546 LOC102723996A0A087X1L8 192 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 A1L4Q6 167 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 DYTNA2CJ06 578 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 CCDC188H7C350 402 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 PCDH17O14917 1159 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 LCMT2O60294 686 aaKnown RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 RDH16O75452 317 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 WFS1O76024 890 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 F10P00742 488 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 SLC35G6P0C7Q6 338 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 NPPBP16860 134 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 XCR1P46094 333 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 CCR8P51685 355 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 AP1S2P56377 157 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 FASTKD3Q14CZ7 662 aaKnown RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 B3GNTL1Q67FW5 361 aaPredicted RBP18.47■□□□□ 0.55
LIME1-201ENST00000309546 DUPD1Q68J44 220 aa18.47■□□□□ 0.55
LIME1-201ENST00000309546 TMEM205Q6UW68 189 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms