RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 RPS13P62277 151 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 TMEM115Q12893 351 aaPredicted RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 DOC2AQ14183 400 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 SLBPQ14493 270 aaKnown RBP eCLIP10.36□□□□□ -0.75
MUC4-201ENST00000308466 BRAT1Q6PJG6 821 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 SLCO6A1Q86UG4 719 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 SPERTQ8NA61 448 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 PDPRQ8NCN5 879 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CXorf40AQ8TE69 158 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 PHF10Q8WUB8 498 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CMTM7Q96FZ5 175 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 P2RY13Q9BPV8 354 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 BRINP2Q9C0B6 783 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 KCNH6Q9H252 994 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 EPB41L1Q9H4G0 881 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 DUS2Q9NX74 493 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 SARDHQ9UL12 918 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 OGDHLQ9ULD0 1010 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CEPT1Q9Y6K0 416 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ZNF646O15015 1829 aaPredicted RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 TNFRSF11BO00300 401 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ERAL1O75616 437 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 F11P03951 625 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CLTBP09497 229 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 VIPR1P32241 457 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ASMTP46597 345 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CLDN8P56748 225 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 YBX1P67809 324 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 DUOXA1Q1HG43 343 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 IER5LQ5T953 404 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 MACC1Q6ZN28 852 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 FAM86B1Q8N7N1 296 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 LILRB4Q8NHJ6 448 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 STON2Q8WXE9 905 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 TCEAL4Q96EI5 215 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ZNF583Q96ND8 569 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 VPS35Q96QK1 796 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CWH43Q9H720 699 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ABCD2Q9UBJ2 740 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 MED16Q9Y2X0 877 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ZNF451Q9Y4E5 1061 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ARPC4-TTLL3A0A0A6YYG9 625 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 MEN1O00255 615 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 UGT2B11O75310 529 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CCNDBP1O95273 360 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 MANFP55145 182 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 TIAL1Q01085 375 aaKnown RBP eCLIP10.36□□□□□ -0.75
MUC4-201ENST00000308466 SYT16Q17RD7 645 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 SPATS1Q496A3 300 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 C6orf141Q5SZD1 244 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 FAM180BQ6P0A1 224 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 ERICH5Q6P6B1 374 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 TRIM40Q6P9F5 258 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 TBPL2Q6SJ96 375 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 SLC39A5Q6ZMH5 540 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 MFSD2AQ8NA29 543 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 OR8D1Q8WZ84 308 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 KLK6Q92876 244 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 GTPBP3Q969Y2 492 aaKnown RBP10.36□□□□□ -0.75
MUC4-201ENST00000308466 PRRG3Q9BZD7 231 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 CAPN10Q9HC96 672 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 RAD18Q9NS91 495 aa10.36□□□□□ -0.75
MUC4-201ENST00000308466 MMP20O60882 483 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 NDUFS2O75306 463 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 VNN2O95498 520 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 OR1E2P47887 323 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 NPTX1Q15818 432 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 DGUOKQ16854 277 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 SLC36A3Q495N2 470 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 SMG7Q92540 1137 aaKnown RBP10.35□□□□□ -0.75
MUC4-201ENST00000308466 NACC2Q96BF6 587 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 ITPKCQ96DU7 683 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 PDLIM5Q96HC4 596 aaKnown RBP10.35□□□□□ -0.75
MUC4-201ENST00000308466 ZSCAN5AQ9BUG6 496 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 FAM118AQ9NWS6 357 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 CCL26Q9Y258 94 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 CENPXA8MT69 81 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 H7C0S8 307 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 RGS10O43665 173 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 SLC16A8O95907 504 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 B3GALT4O96024 378 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 EPHX1P07099 455 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 RPS3P23396 243 aaKnown RBP eCLIP10.35□□□□□ -0.75
MUC4-201ENST00000308466 HRH2P25021 359 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 XKR7Q5GH72 579 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 ZNF773Q6PK81 442 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 USP43Q70EL4 1123 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 MMAAQ8IVH4 418 aaKnown RBP10.35□□□□□ -0.75
MUC4-201ENST00000308466 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 KRT78Q8N1N4 520 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 OR9Q1Q8NGQ5 310 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 VANGL1Q8TAA9 524 aaPredicted RBP10.35□□□□□ -0.75
MUC4-201ENST00000308466 PROX1Q92786 737 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 TRIM63Q969Q1 353 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 ZHX1-C8orf76Q96EF9 292 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 HSH2DQ96JZ2 352 aa10.35□□□□□ -0.75
MUC4-201ENST00000308466 NAA50Q9GZZ1 169 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms